RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 GLB1P16278 677 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 ZNF85Q03923 595 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 DYRK1AQ13627 763 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 MFSD13AQ14CX5 517 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 PDZD11Q5EBL8 140 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 TMEM69Q5SWH9 247 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 C12orf10Q9HB07 376 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 SLC22A11Q9NSA0 550 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 hCG_1807616A0A1W2PRN6 198 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 UBL3O95164 117 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 ZNF41P51814 821 aaPredicted RBP14.82□□□□□ -0.04
CTCF-201ENST00000264010 ZNF74Q16587 644 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 EMC4Q5J8M3 183 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 SLC22A10Q63ZE4 541 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 GPR148Q8TDV2 347 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 FCAMRQ8WWV6 532 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 RPS10P5Q9NQ39 176 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 UFSP2Q9NUQ7 469 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 MT-ND4P03905 459 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 S1PR1P21453 382 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 EMP2P54851 167 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 YIF1BQ5BJH7 314 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 OVCH1Q7RTY7 1134 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 DUSP19Q8WTR2 217 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 DUSP23Q9BVJ7 150 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 FKRPQ9H9S5 495 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 CHRNA9Q9UGM1 479 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 GLS2Q9UI32 602 aa14.82□□□□□ -0.04
CTCF-201ENST00000264010 NOP16Q9Y3C1 178 aaKnown RBP14.82□□□□□ -0.04
CTCF-201ENST00000264010 IGHV1OR21-1A0A087WYE8 117 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 TMED7-TICAM2A0A0A6YYA0 188 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 NUDT21O43809 227 aaKnown RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 SUSD5O60279 629 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 SLC43A1O75387 559 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 WNT1P04628 370 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 ART1P52961 327 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 GAS1P54826 345 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 ZBTB37Q5TC79 503 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 PAPD4Q6PIY7 484 aaKnown RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 NLRC3Q7RTR2 1065 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 CARFQ8N187 725 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 PELI1Q96FA3 418 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 NUDT9Q9BW91 350 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 CYSLTR2Q9NS75 346 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 CENPMQ9NSP4 180 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 FAM86C1Q9NVL1 165 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 ATXN7L1Q9ULK2 861 aaPredicted RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 TMED7Q9Y3B3 224 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 TRBV23-1A0A0A0MS06 115 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 WRBO00258 174 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 RPL18Q07020 188 aaKnown RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 KMT5CQ86Y97 462 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 C17orf47Q8NEP4 570 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 ELF4Q99607 663 aaPredicted RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 ZNF649Q9BS31 505 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 SYT4Q9H2B2 425 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 CHRDQ9H2X0 955 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 WDR76Q9H967 626 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 TRAV1-2A0A0B4J238 106 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 KRT33AO76009 404 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 RIDAP52758 137 aaKnown RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 IGLV3-21P80748 117 aaPredicted RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 RASGEF1BQ0VAM2 473 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 RBM39Q14498 530 aaKnown RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 LYSMD4Q5XG99 296 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 KCTD9Q7L273 389 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 RAB11FIP2Q7L804 512 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 ZNF417Q8TAU3 575 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 DCLRE1CQ96SD1 692 aaKnown RBP14.81□□□□□ -0.04
CTCF-201ENST00000264010 CMKLR1Q99788 373 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 MFFQ9GZY8 342 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 PPP4R1LQ9P1A2 415 aa14.81□□□□□ -0.04
CTCF-201ENST00000264010 ZNF705GA8MUZ8 300 aaPredicted RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 SLC16A7O60669 478 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 GIMD1P0DJR0 217 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 KIR2DL3P43628 341 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.8□□□□□ -0.042e-7■■□□□ 14.3
CTCF-201ENST00000264010 DPY19L4Q7Z388 723 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 SERPINA12Q8IW75 414 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 OR10K1Q8NGX5 313 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 OR1L3Q8NH93 324 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 RBP7Q96R05 134 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 MMP25Q9NPA2 562 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 EXOSC3Q9NQT5 275 aaKnown RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 SIRT4Q9Y6E7 314 aaPredicted RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 TCRBV16S1A1N1A0A5B0 115 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 OR6C68A6NDL8 312 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 MT-ATP6P00846 226 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 RAF1P04049 648 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 MAS1P04201 325 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 APEHP13798 732 aaKnown RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 SRMP19623 302 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 ENPP1P22413 925 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 CRABP1P29762 137 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 FLI1Q01543 452 aaPredicted RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 ALKBH1Q13686 389 aaKnown RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 NR0B2Q15466 257 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 COL28A1Q2UY09 1125 aa14.8□□□□□ -0.04
CTCF-201ENST00000264010 DMKNQ6E0U4 476 aaPredicted RBP14.8□□□□□ -0.04
CTCF-201ENST00000264010 MISPQ8IVT2 679 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms