RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SLC43A2Q8N370 569 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 OR5L2Q8NGL0 311 aa12.23□□□□□ -0.45
VMP1-201ENST00000262291 CCNL2Q96S94 520 aaPredicted RBP12.23□□□□□ -0.45
VMP1-201ENST00000262291 FREM3P0C091 2139 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 ACOD1A6NK06 481 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 XKRYO14609 159 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 SLC16A7O60669 478 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 RAD1O60671 282 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 NPIPB7O75200 414 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 ITGA10O75578 1167 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 RENP00797 406 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 PTGDSP41222 190 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 PER3P56645 1201 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 BDH1Q02338 343 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 MRPL28Q13084 256 aaKnown RBP12.22□□□□□ -0.45
VMP1-201ENST00000262291 CDK5R1Q15078 307 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 LIX1LQ8IVB5 337 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 SLC25A18Q9H1K4 315 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 C19orf25Q9UFG5 118 aaPredicted RBP12.22□□□□□ -0.45
VMP1-201ENST00000262291 RPH3AQ9Y2J0 694 aaPredicted RBP12.22□□□□□ -0.45
VMP1-201ENST00000262291 ANKUB1A6NFN9 424 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 PLPP3O14495 311 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 TOR1AO14656 332 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 FABP7O15540 132 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 DOK2O60496 412 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 FMODQ06828 376 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 TMEM81Q6P7N7 255 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 TEX261Q6UWH6 196 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 UPRTQ96BW1 309 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 ZNF160Q9HCG1 818 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 MED29Q9NX70 200 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 KCNG2Q9UJ96 466 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 RASD1Q9Y272 281 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 HS3ST3B1Q9Y662 390 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 U3KQ87 197 aa12.22□□□□□ -0.45
VMP1-201ENST00000262291 A0A1W2PNR3 127 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 KLK2P20151 261 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 HLA-DMAP28067 261 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 SSTR2P30874 369 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 MC2RQ01718 297 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 SGCBQ16585 318 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 AANATQ16613 207 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 CLVS2Q5SYC1 327 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 JSRP1Q96MG2 331 aaPredicted RBP12.21□□□□□ -0.45
VMP1-201ENST00000262291 EMC6Q9BV81 110 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 MS4A7Q9GZW8 240 aaPredicted RBP12.21□□□□□ -0.45
VMP1-201ENST00000262291 SLC26A1Q9H2B4 701 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 PISDQ9UG56 409 aa12.21□□□□□ -0.45
VMP1-201ENST00000262291 MRM2Q9UI43 246 aaKnown RBP12.21□□□□□ -0.45
VMP1-201ENST00000262291 PPIEQ9UNP9 301 aaKnown RBP12.21□□□□□ -0.45
VMP1-201ENST00000262291 AK6Q9Y3D8 172 aaKnown RBP12.21□□□□□ -0.45
VMP1-201ENST00000262291 LINC00862A6NCI5 91 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 C9J4A7 227 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 F10P00742 488 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 CTLA4P16410 223 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 F8A1P23610 371 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 OTX2P32243 289 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 SFTPDP35247 375 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 SOX2P48431 317 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 MAP2K6P52564 334 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 RPS11P62280 158 aaKnown RBP eCLIP12.21□□□□□ -0.46
VMP1-201ENST00000262291 ACTA2P62736 377 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 ACTG2P63267 376 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 INSM1Q01101 510 aaPredicted RBP12.21□□□□□ -0.46
VMP1-201ENST00000262291 MAB21L1Q13394 359 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 SLC35D3Q5M8T2 416 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 SHEQ5VZ18 495 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 MDGA2Q7Z553 956 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 OR2T4Q8NH00 348 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 OIT3Q8WWZ8 545 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 AP3S1Q92572 193 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 UBL7Q96S82 380 aaPredicted RBP12.21□□□□□ -0.46
VMP1-201ENST00000262291 ATPIF1Q9UII2 106 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 LAMP5Q9UJQ1 280 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 FBXO4Q9UKT5 387 aa12.21□□□□□ -0.46
VMP1-201ENST00000262291 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 WNT11O96014 354 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 HOXD4P09016 255 aaPredicted RBP12.2□□□□□ -0.46
VMP1-201ENST00000262291 IFNGR1P15260 489 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 SDHBP21912 280 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 SLC25A1P53007 311 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 RPL27P61353 136 aaKnown RBP12.2□□□□□ -0.46
VMP1-201ENST00000262291 B2MP61769 119 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 IL18Q14116 193 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 ISXQ2M1V0 245 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 XKRXQ6PP77 449 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 SLC16A9Q7RTY1 509 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 TMEM234Q8WY98 164 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 RNF166Q96A37 237 aaPredicted RBP12.2□□□□□ -0.46
VMP1-201ENST00000262291 SMIM19Q96E16 107 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 SPACA9Q96E40 222 aaPredicted RBP12.2□□□□□ -0.46
VMP1-201ENST00000262291 C5orf34Q96MH7 638 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 DPCDQ9BVM2 203 aaPredicted RBP12.2□□□□□ -0.46
VMP1-201ENST00000262291 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 MS4A18H0YCH9 400 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 ZFPL1O95159 310 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 TXNDC12O95881 172 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 COX6A1P12074 109 aa12.2□□□□□ -0.46
VMP1-201ENST00000262291 ELK1P19419 428 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms