RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 APMAPQ9HDC9 416 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 SLC35A3Q9Y2D2 325 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 ADAM18Q9Y3Q7 739 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 SCN4AP35499 1836 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 A8MXK9 166 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 ICOSLGO75144 302 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 SLC34A2O95436 690 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 IFNA2P01563 188 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 POU3F4P49335 361 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 CSNK1G2P78368 415 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 CDK5Q00535 292 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 ZNHIT3Q15649 155 aaPredicted RBP12.18□□□□□ -0.46
CCDC117-201ENST00000249064 TMEM201Q5SNT2 666 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 MCATQ8IVS2 390 aaKnown RBP12.18□□□□□ -0.46
CCDC117-201ENST00000249064 BAP18Q8IXM2 172 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 OR51Q1Q8NH59 317 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 MCOLN1Q9GZU1 580 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 NDOR1Q9UHB4 597 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
CCDC117-201ENST00000249064 BTBD17A6NE02 478 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 OR6C76A6NM76 312 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 SMIM6P0DI80 62 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 EIF2S3P41091 472 aaKnown RBP12.18□□□□□ -0.46
CCDC117-201ENST00000249064 ALG11Q2TAA5 492 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 EIPR1Q53HC9 387 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 NIPAL3Q6P499 406 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 ZNF620Q6ZNG0 422 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 COMTD1Q86VU5 262 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 OR2M4Q96R27 311 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 SAGE1Q9NXZ1 904 aa12.18□□□□□ -0.46
CCDC117-201ENST00000249064 A0A1B0GTH9 108 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 EMC8O43402 210 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 FGF19O95750 216 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 CXCL10P02778 98 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 RAB40ALP0C0E4 278 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 HIST1H1TP22492 207 aaPredicted RBP12.17□□□□□ -0.46
CCDC117-201ENST00000249064 BSGP35613 385 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 PRDX1Q06830 199 aaKnown RBP12.17□□□□□ -0.46
CCDC117-201ENST00000249064 CST6Q15828 149 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 CLEC12BQ2HXU8 276 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 FAM78AQ5JUQ0 283 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 ZNF626Q68DY1 528 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 RAB40AQ8WXH6 277 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 PPP4R1LQ9P1A2 415 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 ING1Q9UK53 422 aaPredicted RBP12.17□□□□□ -0.46
CCDC117-201ENST00000249064 A0A1W2PR48 441 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 NDUFB6O95139 128 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 ZNF888P0CJ79 500 aaPredicted RBP12.17□□□□□ -0.46
CCDC117-201ENST00000249064 GAAP10253 952 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 BCL6P41182 706 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 ZNF77Q15935 545 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 C2orf68Q2NKX9 166 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 C19orf48Q6RUI8 117 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 FAM111BQ6SJ93 734 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 NAXDQ8IW45 347 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 HSD17B11Q8NBQ5 300 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 FGF13Q92913 245 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 CGGBP1Q9UFW8 167 aaPredicted RBP12.17□□□□□ -0.46
CCDC117-201ENST00000249064 CYP8B1Q9UNU6 501 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 ZNF281Q9Y2X9 895 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 DICER1Q9UPY3 1922 aaKnown RBP12.17□□□□□ -0.46
CCDC117-201ENST00000249064 MCIDASD6RGH6 385 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 MBP02144 154 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 C1orf61Q13536 156 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 EXOSC7Q15024 291 aaKnown RBP12.17□□□□□ -0.46
CCDC117-201ENST00000249064 IRF4Q15306 451 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 SECTM1Q8WVN6 248 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 PNPLA2Q96AD5 504 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 UQCC1Q9NVA1 299 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 WASF3Q9UPY6 502 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 PPIL1Q9Y3C6 166 aa12.17□□□□□ -0.46
CCDC117-201ENST00000249064 OTOL1A6NHN0 477 aaPredicted RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 OR5K4A6NMS3 321 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 CDC42EP2O14613 210 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 SOX15O60248 233 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 B4GALT2O60909 372 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 PAPLNO95428 1278 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 GP1BAP07359 652 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 PDX1P52945 283 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 SMAD2Q15796 467 aaKnown RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 C11orf49Q9H6J7 331 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 C6orf106Q9H6K1 298 aaPredicted RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 TUBG2Q9NRH3 451 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 RFPL4AA6NLU0 287 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 SNRPGP15A8MWD9 76 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 RFPL4AL1F8VTS6 287 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 PRKNO60260 465 aaPredicted RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 FABP4P15090 132 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 TRHRP34981 398 aaPredicted RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 ALDH3B1P43353 468 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 PPIAP62937 165 aaKnown RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 GPM6BQ13491 265 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 KLF9Q13886 244 aaPredicted RBP12.16□□□□□ -0.46
CCDC117-201ENST00000249064 UBXN2BQ14CS0 331 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 PABPC1L2AQ5JQF8 200 aa12.16□□□□□ -0.46
CCDC117-201ENST00000249064 ACER2Q5QJU3 275 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms