RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 OR5B2Q96R09 309 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 EXTL2Q9UBQ6 330 aa20.86■□□□□ 0.93
MSX2-201ENST00000239243 SNPHO15079 494 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 ZNF806P0C7X5 589 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 CCL3P10147 92 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 EPXP11678 715 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 RBMS1P29558 406 aaKnown RBP20.85■□□□□ 0.93
MSX2-201ENST00000239243 RANBP1P43487 201 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 ROM1Q03395 351 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 FDX2Q6P4F2 183 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 UEVLDQ8IX04 471 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 SAMD12Q8N8I0 201 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 NTNG2Q96CW9 530 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 DERL3Q96Q80 235 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 NEURL2Q9BR09 285 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 SLCO1C1Q9NYB5 712 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 COA3Q9Y2R0 106 aaPredicted RBP20.85■□□□□ 0.93
MSX2-201ENST00000239243 NPR2P20594 1047 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 DSCR4P56555 118 aaPredicted RBP20.85■□□□□ 0.93
MSX2-201ENST00000239243 OR2B6P58173 313 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 RPS18P62269 152 aaKnown RBP20.85■□□□□ 0.93
MSX2-201ENST00000239243 SF3A2Q15428 464 aaKnown RBP20.85■□□□□ 0.93
MSX2-201ENST00000239243 ETFDHQ16134 617 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 MEP1BQ16820 701 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 SLC25A35Q3KQZ1 300 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 RGP1Q92546 391 aaPredicted RBP20.85■□□□□ 0.93
MSX2-201ENST00000239243 DCBLD2Q96PD2 775 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 SPRY4Q9C004 299 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 SLITRK2Q9H156 845 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 SACM1LQ9NTJ5 587 aa20.85■□□□□ 0.93
MSX2-201ENST00000239243 KHDRBS3O75525 346 aaKnown RBP20.84■□□□□ 0.93
MSX2-201ENST00000239243 HLA-DQB1P01920 261 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 ZNF823P16415 610 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 TCEA1P23193 301 aaKnown RBP20.84■□□□□ 0.93
MSX2-201ENST00000239243 PTGS2P35354 604 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 SLC17A1Q14916 467 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 ZNF239Q16600 458 aaKnown RBP20.84■□□□□ 0.93
MSX2-201ENST00000239243 CEP78Q5JTW2 689 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 OR1J4Q8NGS1 313 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 TMEM185BQ9H7F4 350 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 TMEM9BQ9NQ34 198 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 MED29Q9NX70 200 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 MALT1Q9UDY8 824 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 CCDC187A0A096LP49 1063 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 OR4C45A6NMZ5 311 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 SPNP16150 400 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 DPP4P27487 766 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 P2RY14Q15391 338 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 ZNF676Q8N7Q3 588 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 C19orf18Q8NEA5 215 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 OR5M1Q8NGP8 315 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 RBP7Q96R05 134 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 EDEM2Q9BV94 578 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 SLC22A4Q9H015 551 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 ELOVL3Q9HB03 270 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 B3GAT1Q9P2W7 334 aa20.84■□□□□ 0.93
MSX2-201ENST00000239243 TRBV5-5A0A0J9YX44 114 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 ACOD1A6NK06 481 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 PSKH1P11801 424 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 LIFP15018 202 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 CCR9P51686 369 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 BIDP55957 195 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 TEX30Q5JUR7 227 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 KRT77Q7Z794 578 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 ESX1Q8N693 406 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 SLC26A10Q8NG04 563 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 FOXN4Q96NZ1 517 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 AMELYQ99218 206 aa20.83■□□□□ 0.93
MSX2-201ENST00000239243 ING1Q9UK53 422 aaPredicted RBP20.83■□□□□ 0.93
MSX2-201ENST00000239243 C9orf172C9J069 976 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 PIN1P1O15428 100 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 ZNF254O75437 659 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 RAF1P04049 648 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 HRGP04196 525 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 SLC35A1P78382 337 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 EIF2B1Q14232 305 aaKnown RBP20.82■□□□□ 0.92
MSX2-201ENST00000239243 LRRN1Q6UXK5 716 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 LRRC69Q6ZNQ3 347 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 NRARPQ7Z6K4 114 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.82■□□□□ 0.92
MSX2-201ENST00000239243 RNF128Q8TEB7 428 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 TMEM41AQ96HV5 264 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 TXNDC15Q96J42 360 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 C4orf45Q96LM5 186 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 KLHL9Q9P2J3 617 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 AK6Q9Y3D8 172 aaKnown RBP20.82■□□□□ 0.92
MSX2-201ENST00000239243 A0A1W2PNR3 127 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 RIDAP52758 137 aaKnown RBP20.82■□□□□ 0.92
MSX2-201ENST00000239243 TAB1Q15750 504 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 TMEM176BQ3YBM2 270 aaPredicted RBP20.82■□□□□ 0.92
MSX2-201ENST00000239243 OR52N5Q8NH56 324 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 GPR148Q8TDV2 347 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 MIB2Q96AX9 1013 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 CMTM3Q96MX0 182 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 MRI1Q9BV20 369 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 ABHD6Q9BV23 337 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 PROK2Q9HC23 129 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 TCF7L1Q9HCS4 588 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 KLHL13Q9P2N7 655 aa20.82■□□□□ 0.92
MSX2-201ENST00000239243 PCDHGA1Q9Y5H4 931 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms