RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF850A8MQ14 1090 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 J3QR89 54 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ERI3O43414 337 aaKnown RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 NXPE4Q6UWF7 544 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 TMPRSS11FQ6ZWK6 438 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 RBM45Q8IUH3 476 aaKnown RBP11.85□□□□□ -0.51
VAMP4-201ENST00000236192 OR2AJ1Q8NGZ0 328 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 PLD4Q96BZ4 506 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 PIK3IP1Q96FE7 263 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 C5orf34Q96MH7 638 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 ORAI3Q9BRQ5 295 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 C2orf88Q9BSF0 95 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 P2RY12Q9H244 342 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 NCOR1P1Q9H4R4 102 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 DMRT3Q9NQL9 472 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 LAMP3Q9UQV4 416 aa11.85□□□□□ -0.51
VAMP4-201ENST00000236192 SERPINA7P05543 415 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 RPS24P62847 133 aaKnown RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 TPRG1Q6ZUI0 275 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 GPX8Q8TED1 209 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 DYRK2Q92630 601 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 JSRP1Q96MG2 331 aaPredicted RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 DERL3Q96Q80 235 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 MYADMQ96S97 322 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 RAB33BQ9H082 229 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 HINT3Q9NQE9 182 aaKnown RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 FKBP11Q9NYL4 201 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 FBXO4Q9UKT5 387 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 IER3IP1Q9Y5U9 82 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 A0A0U1RQK1 487 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 SMIM35A0A1B0GVV1 85 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 GLOD5A6NK44 160 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 NOVA1P51513 510 aaKnown RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 NUTF2P61970 127 aaKnown RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 HNRNPKP61978 463 aaKnown RBP eCLIP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 TBPL1P62380 186 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 RNF128Q8TEB7 428 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 IGSF8Q969P0 613 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 NEURL3Q96EH8 262 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 PDCD1LG2Q9BQ51 273 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 HIPK2Q9H2X6 1198 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 PARP11Q9NR21 331 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 SLCO1C1Q9NYB5 712 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 TAC3Q9UHF0 121 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 GABRQQ9UN88 632 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 UBE2J1Q9Y385 318 aaPredicted RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 B3GALT1Q9Y5Z6 326 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 TBX18O95935 607 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF136P52737 540 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 SEMG2Q02383 582 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 DHRS2Q13268 280 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 DHCR24Q15392 516 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 SLC18B1Q6NT16 456 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 ZNF550Q7Z398 422 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 MTFP1Q9UDX5 166 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 EXOGQ9Y2C4 368 aaKnown RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 KLF2Q9Y5W3 355 aaPredicted RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 ZFC3H1O60293 1989 aaKnown RBP11.84□□□□□ -0.51
VAMP4-201ENST00000236192 MARCH11A6NNE9 402 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 TAS2R46P59540 309 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 DHODHQ02127 395 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 OR7E24Q6IFN5 339 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 PET117Q6UWS5 81 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 OR5K2Q8NHB8 316 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 TMEM106AQ96A25 262 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 ST6GALNAC5Q9BVH7 336 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 DOK5Q9P104 306 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 SLC7A11Q9UPY5 501 aa11.84□□□□□ -0.51
VAMP4-201ENST00000236192 A0A1B0GUL6 1792 aa11.83□□□□□ -0.51
VAMP4-201ENST00000236192 PLPP2O43688 288 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 ADAP1O75689 374 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 GLSO94925 669 aaPredicted RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 FURINP09958 794 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 HOXA5P20719 270 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 AVPR2P30518 371 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 THPOP40225 353 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 LCN6P62502 163 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 DLK1P80370 383 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 NAAAQ02083 359 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 GPNMBQ14956 572 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 TRIM61Q5EBN2 209 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 TCTN3Q6NUS6 607 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 ZNF619Q8N2I2 560 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 OR5L2Q8NGL0 311 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 LYSMD1Q96S90 227 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SLC23A2Q9UGH3 650 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 MICAL3Q7RTP6 2002 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 ASGR2P07307 311 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 HSD11B1P28845 292 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 ACVR1Q04771 509 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
VAMP4-201ENST00000236192 SLC36A2Q495M3 483 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 CHST9Q7L1S5 443 aa11.83□□□□□ -0.52
VAMP4-201ENST00000236192 PPTC7Q8NI37 304 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms