RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MESTQ5EB52 335 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 FGD3Q5JSP0 725 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF362Q5T0B9 420 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 C1QTNF12Q5T7M4 302 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 TMEM154Q6P9G4 183 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ABHD12BQ7Z5M8 362 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 NOXO1Q8NFA2 376 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 OR6N1Q8NGY5 312 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 CCDC124Q96CT7 223 aaKnown RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ALPK1Q96QP1 1244 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 GPX7Q96SL4 187 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 DDOQ99489 341 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ULBP2Q9BZM5 246 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 MUC13Q9H3R2 512 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 MAGIXQ9H6Y5 334 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 OBP2BQ9NPH6 170 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF701Q9NV72 531 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 NKX1-2Q9UD57 310 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-201ENST00000230480 IL20RAQ9UHF4 553 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 POMPQ9Y244 141 aa11.92□□□□□ -0.5
VEGFA-201ENST00000230480 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 YLPM1P49750 1951 aaKnown RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 TCRBV3S1A0A5B6 114 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 CENPBD1B2RD01 187 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 AKAP8O43823 692 aaKnown RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 NDUFS7O75251 213 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 CD14P08571 375 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 MMP7P09237 267 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 SAGP10523 405 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 DNASE1P24855 282 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 CDAP32320 146 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 PTDSS1P48651 473 aaKnown RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 SPIBQ01892 262 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 NAAAQ02083 359 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 C3orf36Q3SXR2 165 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 ANKDD1AQ495B1 522 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 MTX3Q5HYI7 312 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 KLHL17Q6TDP4 642 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF813Q6ZN06 617 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 PTCHD4Q6ZW05 846 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 SSX8Q7RTT4 187 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 DTX2Q86UW9 622 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 CYP4Z1Q86W10 505 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 ARIH2OSQ8N7S6 290 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 WFDC11Q8NEX6 87 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 OR9Q2Q8NGE9 314 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 MS4A3Q96HJ5 214 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 SLC38A2Q96QD8 506 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 KATNB1Q9BVA0 655 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 VCX3AQ9NNX9 186 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 NGBQ9NPG2 151 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 CISD1Q9NZ45 108 aaKnown RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 MOKQ9UQ07 419 aa11.91□□□□□ -0.5
VEGFA-201ENST00000230480 FAM32AQ9Y421 112 aaKnown RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 MAGED1Q9Y5V3 778 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 SETD2Q9BYW2 2564 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-201ENST00000230480 A0A1W2PRG6 482 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 UNC119BA6NIH7 251 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 H7C1C5 153 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 DCTN6O00399 190 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 GYG2O15488 501 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 GMNNO75496 209 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 TXNDC12O95881 172 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 GASTP01350 101 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 IGHG1P01857 330 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 ZNF35P13682 527 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 ITGA2P17301 1181 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 ACVR1BP36896 505 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 CDKN2AP42771 156 aaKnown RBP11.9□□□□□ -0.5
VEGFA-201ENST00000230480 LCN6P62502 163 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 NKX6-1P78426 367 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-201ENST00000230480 PIGFQ07326 219 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 TOP3AQ13472 1001 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-201ENST00000230480 KEAP1Q14145 624 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 TMEM108Q6UXF1 575 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 C20orf204Q6ZNR8 217 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 SLC22A24Q8N4F4 322 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 PAPD5Q8NDF8 572 aaKnown RBP11.9□□□□□ -0.5
VEGFA-201ENST00000230480 OR8D4Q8NGM9 314 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 SMAP2Q8WU79 429 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-201ENST00000230480 RASD2Q96D21 266 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 CHID1Q9BWS9 393 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 PLA2G12AQ9BZM1 189 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 TRIM15Q9C019 465 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 NTN4Q9HB63 628 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 DLL4Q9NR61 685 aa11.9□□□□□ -0.5
VEGFA-201ENST00000230480 BEX4Q9NWD9 120 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-201ENST00000230480 IGHV2OR16-5A0A0B4J2B6 119 aa11.89□□□□□ -0.51
VEGFA-201ENST00000230480 TMEM129A0AVI4 362 aa11.89□□□□□ -0.51
VEGFA-201ENST00000230480 SLC22A23A1A5C7 686 aa11.89□□□□□ -0.51
VEGFA-201ENST00000230480 AQP12BA6NM10 295 aa11.89□□□□□ -0.51
VEGFA-201ENST00000230480 FPR3P25089 353 aa11.89□□□□□ -0.51
VEGFA-201ENST00000230480 IFNA8P32881 189 aa11.89□□□□□ -0.51
VEGFA-201ENST00000230480 ERFP50548 548 aa11.89□□□□□ -0.51
VEGFA-201ENST00000230480 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
VEGFA-201ENST00000230480 IDH3GP51553 393 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms