RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TLNRD1Q9H1K6 362 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 RPS10P5Q9NQ39 176 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZFP57Q9NU63 452 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 DNAJB12Q9NXW2 375 aaKnown RBP8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ABRACLQ9P1F3 81 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 HEBP2Q9Y5Z4 205 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 K7EQS6 105 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 SLC25A12O75746 678 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 KRT33AO76009 404 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 HIST1H2ABP04908 130 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 IFNA4P05014 189 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 APODP05090 189 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 NME1P15531 152 aaKnown RBP8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 SRMP19623 302 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 CNR1P21554 472 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ACTC1P68032 377 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ACTA1P68133 377 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ENPP2Q13822 863 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR2B11Q5JQS5 317 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 TMEM69Q5SWH9 247 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZNF776Q68DI1 518 aaPredicted RBP8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 HIST3H2AQ7L7L0 130 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 SLC29A4Q7RTT9 530 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 FAM122BQ7Z309 247 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 SMIM4Q8WVI0 70 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 HIST1H2ACQ93077 130 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 SLC25A38Q96DW6 304 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 DNAJA3Q96EY1 480 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 TSSK2Q96PF2 358 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 CNN2Q99439 309 aaKnown RBP8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 SSX3Q99909 188 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 TSPAN10Q9H1Z9 355 aaPredicted RBP8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZNF629Q9UEG4 869 aaPredicted RBP8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 ICAM5Q9UMF0 924 aa8.56□□□□□ -1.04
HLA-DOA-201ENST00000229829 CFAP54Q96N23 3096 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 M0R036 132 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR2T1O43869 369 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ARL6IP5O75915 188 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 GDI1P31150 447 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 RPL4P36578 427 aaKnown RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 SOX2P48431 317 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 DEFB110Q30KQ9 67 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZNF528Q3MIS6 628 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 TMEM196Q5HYL7 178 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 TSSK4Q6SA08 328 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ABHD13Q7L211 337 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 GTPBP8Q8N3Z3 284 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 FCAMRQ8WWV6 532 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ANKRD9Q96BM1 317 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 SCARF2Q96GP6 870 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 STACQ99469 402 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 NKX3-1Q99801 234 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 PRO1933Q9H354 126 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 NRIP3Q9NQ35 241 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 UFSP2Q9NUQ7 469 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 NCDNQ9UBB6 729 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZNF230Q9UIE0 474 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 SERTAD3Q9UJW9 196 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 CDV3Q9UKY7 258 aaKnown RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 PCDHGA5Q9Y5G8 931 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 A0A087WV62 115 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR6C76A6NM76 312 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ST8SIA5O15466 376 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 HPP00738 406 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 IFNGP01579 166 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 SNRNP70P08621 437 aaKnown RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR2T7P0C7T2 308 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 DAOP14920 347 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 FOSL2P15408 326 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 COL9A1P20849 921 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 KIR2DL1P43626 348 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 H2BFSP57053 126 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 RAB2AP61019 212 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 NUDT18Q6ZVK8 323 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR2W3Q7Z3T1 314 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 CAMKVQ8NCB2 501 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR2T27Q8NH04 317 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 AKR7LQ8NHP1 331 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 NUBPLQ8TB37 319 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 RGP1Q92546 391 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 FGF14Q92915 247 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 CTHRC1Q96CG8 243 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 HSPA12BQ96MM6 686 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZFYVE21Q9BQ24 234 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 PIGQQ9BRB3 760 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 SUCNR1Q9BXA5 334 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 KLF2Q9Y5W3 355 aaPredicted RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 TDRD6O60522 2096 aaKnown RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 A0A1B0GTH9 108 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 A0A1B0GV50 99 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 TMEM218A2RU14 115 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 OR6C65A6NJZ3 312 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 RDH16O75452 317 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 RPP14O95059 124 aaKnown RBP8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZFPL1O95159 310 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 IFNGR1P15260 489 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 G0S2P27469 103 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 HACD4Q5VWC8 232 aa8.55□□□□□ -1.04
HLA-DOA-201ENST00000229829 ZNF511Q8NB15 262 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms