RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 AGBL5Q8NDL9 886 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 OR2M3Q8NG83 312 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 RNF128Q8TEB7 428 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 NSMAFQ92636 917 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 MCHR2Q969V1 340 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 PMEPA1Q969W9 287 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 DDIT4LQ96D03 193 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 SPACA9Q96E40 222 aaPredicted RBP17.18■□□□□ 0.34
YBX3-201ENST00000228251 IMMP1LQ96LU5 166 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 SMAD5Q99717 465 aaKnown RBP17.18■□□□□ 0.34
YBX3-201ENST00000228251 KLRF1Q9NZS2 232 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 PPP4R1LQ9P1A2 415 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 V9GY05 133 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 CACNA1CQ13936 2221 aa17.18■□□□□ 0.34
YBX3-201ENST00000228251 FAM240BA0A1B0GVZ2 78 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 A0A1W2PNV4 684 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 SHISA8B8ZZ34 492 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 EEF1E1O43324 174 aaKnown RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 KLF7O75840 302 aaPredicted RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 WNT11O96014 354 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 CFPP27918 469 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 CRABP1P29762 137 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 RASGEF1BQ0VAM2 473 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 TRIM61Q5EBN2 209 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 WDR38Q5JTN6 314 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 STPG1Q5TH74 334 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 RSBN1Q5VWQ0 802 aaPredicted RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 ZNF57Q68EA5 555 aaPredicted RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 SLC18B1Q6NT16 456 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 LRRN1Q6UXK5 716 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 ESPNLQ6ZVH7 1005 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 CMTM4Q8IZR5 234 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 SLC26A10Q8NG04 563 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 FOXN4Q96NZ1 517 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 ZNF700Q9H0M5 742 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 HDHD2Q9H0R4 259 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 ELOVL3Q9HB03 270 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 ALKBH4Q9NXW9 302 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 ZNF221Q9UK13 617 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 IGHV1-45A0A0A0MS14 117 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 CENPBD1B2RD01 187 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 GPR171O14626 319 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 SRSF10O75494 262 aaKnown RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 CCL4P13236 92 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 CCKBRP32239 447 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 DAP3P51398 398 aaKnown RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 SLC35D2Q76EJ3 337 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 RELTQ969Z4 430 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 DEFB126Q9BYW3 111 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 SDHAF3Q9NRP4 125 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 B3GAT1Q9P2W7 334 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 RABL2AQ9UBK7 228 aaPredicted RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 RABL2BQ9UNT1 228 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 B3GALT5Q9Y2C3 310 aa17.17■□□□□ 0.34
YBX3-201ENST00000228251 CHCHD2Q9Y6H1 151 aaPredicted RBP17.17■□□□□ 0.34
YBX3-201ENST00000228251 ZDBF2Q9HCK1 2354 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 DMDP11532 3685 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 TRAV8-7A0A075B6U6 113 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 PNPP00491 289 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 IFNGR1P15260 489 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 DGCR2P98153 550 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 HSF1Q00613 529 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 INPP5JQ15735 1006 aaPredicted RBP17.16■□□□□ 0.34
YBX3-201ENST00000228251 TATDN3Q17R31 274 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 TBRG1Q3YBR2 411 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 HES5Q5TA89 166 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 FAM205BPQ63HN1 556 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 TMEM81Q6P7N7 255 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 ZNF454Q8N9F8 522 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 ADPRHL1Q8NDY3 354 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 OR51A4Q8NGJ6 313 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 GPR148Q8TDV2 347 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 MRI1Q9BV20 369 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 ABHD6Q9BV23 337 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 ABCG5Q9H222 651 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 TEKT2Q9UIF3 430 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 PAIP2BQ9ULR5 123 aaKnown RBP17.16■□□□□ 0.34
YBX3-201ENST00000228251 COA3Q9Y2R0 106 aaPredicted RBP17.16■□□□□ 0.34
YBX3-201ENST00000228251 CFAP54Q96N23 3096 aa17.16■□□□□ 0.34
YBX3-201ENST00000228251 MUC3AQ02505 3323 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 CALCBP10092 127 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 COX6A1P12074 109 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 INPP1P49441 399 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 P2RY4P51582 365 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 PITPNAQ00169 270 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 GLO1Q04760 184 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 WDSUB1Q8N9V3 476 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 ZNF248Q8NDW4 579 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 ZNF671Q8TAW3 534 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 CREB3L1Q96BA8 519 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 COMMD4Q9H0A8 199 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 METTL7AQ9H8H3 244 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 OR5V1Q9UGF6 321 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 NUFIP1Q9UHK0 495 aaKnown RBP17.15■□□□□ 0.34
YBX3-201ENST00000228251 CLEC4AQ9UMR7 237 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 N6AMT1Q9Y5N5 214 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 ALG5Q9Y673 324 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 CACNG2Q9Y698 323 aa17.15■□□□□ 0.34
YBX3-201ENST00000228251 IGKV1D-43A0A0B4J1Z2 117 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms