RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 SEMA4CQ9C0C4 833 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 HINT3Q9NQE9 182 aaKnown RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 FBXL4Q9UKA2 621 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 SESN1Q9Y6P5 492 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 CEP295Q9C0D2 2601 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 SVILO95425 2214 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 VSTM2BA6NLU5 285 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR6C76A6NM76 312 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 C11orf98E9PRG8 122 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF593O00488 134 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 UMODP07911 640 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 PNLIPRP2P54317 469 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF322Q6U7Q0 402 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 MBOAT2Q6ZWT7 520 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 MEIOBQ8N635 442 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 FAM98AQ8NCA5 519 aaKnown RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 C17orf47Q8NEP4 570 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 GAL3ST1Q99999 423 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 EMC7Q9NPA0 242 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 IL17BQ9UHF5 180 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 APC2O95996 2303 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 ANKRD61A6NGH8 418 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 UNC119BA6NIH7 251 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 SHISA8B8ZZ34 492 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF354AO60765 605 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 SPDEFO95238 335 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF117Q03924 483 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 INPP5JQ15735 1006 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 LRRC28Q86X40 367 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 RELL2Q8NC24 303 aaPredicted RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR52B4Q8NGK2 314 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 NR4A3Q92570 626 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 SCMH1Q96GD3 660 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 THOC3Q96J01 351 aaKnown RBP10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 TNFRSF13CQ96RJ3 184 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 HCAR1Q9BXC0 346 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 WDR54Q9H977 334 aa10.6□□□□□ -0.71
TNFAIP1-201ENST00000226225 DCDC2BA2VCK2 349 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 TOR1AO14656 332 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 FMO6PO60774 539 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 KHDRBS3O75525 346 aaKnown RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 HLA-DQB1P01920 261 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ANXA7P20073 488 aaKnown RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 FGF9P31371 208 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 MAP3K8P41279 467 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 GAS1P54826 345 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZP1P60852 638 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CDK5Q00535 292 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF141Q15928 474 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 HES5Q5TA89 166 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 WBP2NLQ6ICG8 309 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ATRAIDQ6UW56 229 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 C3P1Q6ZMU1 363 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ARIH2OSQ8N7S6 290 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 THAP4Q8WY91 577 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 SGTBQ96EQ0 304 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 SOSTQ9BQB4 213 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF436Q9C0F3 470 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR52D1Q9H346 318 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 TAS2R10Q9NYW0 307 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CDV3Q9UKY7 258 aaKnown RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 hCG_1807616A0A1W2PRN6 198 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CDC42EP2O14613 210 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 TRAPPC6AO75865 159 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CLPSP04118 112 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ADRB1P08588 477 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF41P51814 821 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 EXT1Q16394 746 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 GSG1Q2KHT4 349 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CLLU1Q5K131 121 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 WDR88Q6ZMY6 472 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ZNF440Q8IYI8 595 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 POGLUT1Q8NBL1 392 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR5W2Q8NH69 310 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 LHFPL5Q8TAF8 219 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 RASL10BQ96S79 203 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 RTN4RQ9BZR6 473 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 SLC25A18Q9H1K4 315 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 KCNN2Q9H2S1 579 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CYSLTR2Q9NS75 346 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CA10Q9NS85 328 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 PCDHGA1Q9Y5H4 931 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 LPLP06858 475 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 F8A1P23610 371 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 RAD52P43351 418 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 OR12D2P58182 307 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 TSPAN31Q12999 210 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 KLHL26Q53HC5 615 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 HBMQ6B0K9 141 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 VASNQ6EMK4 673 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 METAP1DQ6UB28 335 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 NDUFAF7Q7L592 441 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 CXXC5Q7LFL8 322 aaKnown RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 RFKQ969G6 155 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 LIN37Q96GY3 246 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 C4orf36Q96KX1 117 aa10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 WDR77Q9BQA1 342 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP1-201ENST00000226225 ARL6Q9H0F7 186 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms