RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PDFQ9HBH1 243 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 DIMT1Q9UNQ2 313 aaKnown RBP17.37■□□□□ 0.37
SMPD3-201ENST00000219334 EVI2BP34910 448 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 HBG1P69891 147 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 HBG2P69892 147 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 ACSM1Q08AH1 577 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 DOK3Q7L591 496 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 C1orf87Q8N0U7 546 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 OR6M1Q8NGM8 313 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 LGALS14Q8TCE9 139 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 CLN5O75503 358 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 QDPRP09417 244 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 SLC2A1P11166 492 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 RPS25P62851 125 aaKnown RBP17.37■□□□□ 0.37
SMPD3-201ENST00000219334 BTG2P78543 158 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 ST8SIA1Q92185 356 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 UHRF2Q96PU4 802 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 CHST8Q9H2A9 424 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 SPTY2D1-AS1A0A0U1RR47 76 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 FAM53BQ14153 422 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 AGBL4Q5VU57 503 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 Q6ZNB5 142 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 PHYHIPQ92561 330 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 OR52A5Q9H2C5 316 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 HSBP1L1C9JCN9 74 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 STMND1H3BQB6 276 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CRYABP02511 175 aaKnown RBP17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CLEC3BP05452 202 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 TBXA2RP21731 343 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CCL7P80098 99 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 DUSP2Q05923 314 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 ATPAF1Q5TC12 328 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CST9LP1Q5W188 147 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 ST7LQ8TDW4 575 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 FAM53CQ9NYF3 392 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 PRELID1Q9Y255 219 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 M0R1B8 84 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 ARHGAP33O14559 1287 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 ZNF254O75437 659 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 DESI1Q6ICB0 168 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 GFRALQ6UXV0 394 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CPNE4Q96A23 557 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-201ENST00000219334 UFSP2Q9NUQ7 469 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 LUZP4Q9P127 313 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 RAB22AQ9UL26 194 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 POLDIP2Q9Y2S7 368 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 A0A1W2PNR3 127 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CXCL13O43927 109 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 OR2J2O76002 312 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CEACAM5P06731 702 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 NAGAP17050 411 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 CHATP28329 748 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 MTNR1BP49286 362 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 PGFP49763 221 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 SPEM2Q0P670 501 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 DHRS4L2Q6PKH6 230 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 GLIPR1L1Q6UWM5 242 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 BEST4Q8NFU0 473 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 PFN4Q8NHR9 129 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 GPR55Q9Y2T6 319 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-201ENST00000219334 TIAM2Q8IVF5 1701 aa17.36■□□□□ 0.37
SMPD3-201ENST00000219334 K7EPK0 472 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 GABRG2P18507 467 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 SHC1P29353 583 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 ARL16Q0P5N6 197 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 GLYATL3Q5SZD4 288 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 KLHDC8BQ8IXV7 354 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 FAM71E2Q8N5Q1 922 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 TMEM43Q9BTV4 400 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 SPACA1Q9HBV2 294 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 RAB6AP20340 208 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 MPLP40238 635 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 EIF3IQ13347 325 aaKnown RBP17.35■□□□□ 0.37
SMPD3-201ENST00000219334 SAXO2Q658L1 398 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 NLRP8Q86W28 1048 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 SUMF2Q8NBJ7 301 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 ZNF419Q96HQ0 510 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-201ENST00000219334 BCO1Q9HAY6 547 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 HEYLQ9NQ87 328 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-201ENST00000219334 PSORS1C1Q9UIG5 152 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 E9PI62 339 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 SELENOFO60613 162 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 CLDN15P56746 228 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 ACVR1Q04771 509 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 KANSL1Q7Z3B3 1105 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 COMMD7Q86VX2 200 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 OR51A2Q8NGJ7 313 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 SNX11Q9Y5W9 270 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 LRP5LA4QPB2 252 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 LILRA5A6NI73 299 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 TGM6O95932 706 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 LGI1O95970 557 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 IGFBP6P24592 240 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-201ENST00000219334 RAB13P51153 203 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 RPL11P62913 178 aaKnown RBP17.35■□□□□ 0.37
SMPD3-201ENST00000219334 PEA15Q15121 130 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 WDR88Q6ZMY6 472 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 SLC35G3Q8N808 338 aa17.35■□□□□ 0.37
SMPD3-201ENST00000219334 IGLV3-25P01717 112 aa17.34■□□□□ 0.37
SMPD3-201ENST00000219334 SFXN4Q6P4A7 337 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms