RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NKX2-6A6NCS4 301 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 H0YAE9 185 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 CNOT4O95628 575 aaKnown RBP23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 GNAO1P09471 354 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 CLUP10909 449 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 HSPA13P48723 471 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 ETFDHQ16134 617 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 CXXC5Q7LFL8 322 aaKnown RBP23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 BCDIN3DQ7Z5W3 292 aaKnown RBP23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 OR6V1Q8N148 313 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 FOXN4Q96NZ1 517 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 APOL4Q9BPW4 351 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 RASSF1Q9NS23 344 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 FAM171A2A8MVW0 826 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 DHHO43323 396 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 SEC14L2O76054 403 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 AGFG2O95081 481 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 ITGA5P08648 1049 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 IGHV1-2P23083 117 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 SLC25A47Q6Q0C1 308 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 DEPDC4Q8N2C3 294 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 BBS1Q8NFJ9 593 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 OR51L1Q8NGJ5 315 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 OR8J1Q8NGP2 316 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 MUS81Q96NY9 551 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 ZNF184Q99676 751 aaPredicted RBP23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 ZNF226Q9NYT6 803 aa23.99■■□□□ 1.43
CHMP4B-201ENST00000217402 LYZL6O75951 148 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 CENPAP49450 140 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 EFNB1P98172 346 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 C10orf128Q5T292 105 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 ZNF691Q5VV52 312 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 DNM1P34Q6PK57 102 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 CXorf67Q86X51 503 aaPredicted RBP23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 ENTHD1Q8IYW4 607 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 ZNF808Q8N4W9 903 aaPredicted RBP23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 PROKR2Q8NFJ6 384 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 HTRA1Q92743 480 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 PTP4A1Q93096 173 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 NMNAT2Q9BZQ4 307 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 OR51V1Q9H2C8 321 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 AASSQ9UDR5 926 aa23.98■■□□□ 1.43
CHMP4B-201ENST00000217402 A0A1W2PPL8 197 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 RPL36A-HNRNPH2H7BZ11 118 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 SPI1P17947 270 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 MPGP29372 298 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 CRABP1P29762 137 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 PYCR1P32322 319 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 ASCL1P50553 236 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 ZNF133P52736 654 aaPredicted RBP23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 IL5RAQ01344 420 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 TSC22D1Q15714 1073 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 XKRXQ6PP77 449 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 OR2T4Q8NH00 348 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 GALNT8Q9NY28 637 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 TAS2R16Q9NYV7 291 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 B9D1Q9UPM9 204 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 FKBP7Q9Y680 259 aa23.97■■□□□ 1.43
CHMP4B-201ENST00000217402 KHDRBS3O75525 346 aaKnown RBP23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 CDAP32320 146 aa23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 ZNF84P51523 738 aa23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 SLC25A1P53007 311 aa23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 ARF1P84077 181 aaKnown RBP23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 KLHL12Q53G59 568 aa23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 ZNRF4Q8WWF5 429 aa23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 KCNJ16Q9NPI9 418 aa23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 COA3Q9Y2R0 106 aaPredicted RBP23.96■■□□□ 1.43
CHMP4B-201ENST00000217402 IGLV1-36A0A0B4J1U3 117 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 GPANK1O95872 356 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 COX5AP20674 150 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 AGAP20933 346 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 P2RY6Q15077 328 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 ZBTB46Q86UZ6 589 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 TRUB1Q8WWH5 349 aaKnown RBP23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 RACGAP1Q9H0H5 632 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 SEC61A2Q9H9S3 476 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 DNAJC27Q9NZQ0 273 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 UGT2A1Q9Y4X1 527 aa23.95■■□□□ 1.43
CHMP4B-201ENST00000217402 FLNCQ14315 2725 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 ZNF99A8MXY4 864 aaPredicted RBP23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 RAD51DO75771 328 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 CLDN14O95500 239 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 RNF224P0DH78 156 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 B4GALT1P15291 398 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 FAM27E3Q08E93 113 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 IL18R1Q13478 541 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 C8orf59Q8N0T1 100 aaPredicted RBP23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 ZNF433Q8N7K0 673 aaPredicted RBP23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 SETD9Q8NE22 299 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 FOXB1Q99853 325 aa23.95■■□□□ 1.42
CHMP4B-201ENST00000217402 CIB4A0PJX0 185 aa23.94■■□□□ 1.42
CHMP4B-201ENST00000217402 RPS7P62081 194 aaKnown RBP23.94■■□□□ 1.42
CHMP4B-201ENST00000217402 SRSF1Q07955 248 aaKnown RBP eCLIP23.94■■□□□ 1.421e-6■□□□□ 11.1
CHMP4B-201ENST00000217402 OTPQ5XKR4 325 aa23.94■■□□□ 1.42
CHMP4B-201ENST00000217402 STAC2Q6ZMT1 411 aa23.94■■□□□ 1.42
CHMP4B-201ENST00000217402 USP51Q70EK9 711 aa23.94■■□□□ 1.42
CHMP4B-201ENST00000217402 OR6K6Q8NGW6 343 aa23.94■■□□□ 1.42
CHMP4B-201ENST00000217402 KISS1RQ969F8 398 aaPredicted RBP23.94■■□□□ 1.42
CHMP4B-201ENST00000217402 CD79BP40259 229 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 SNRPGP62308 76 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms