RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 KCNK17Q96T54 332 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 PLEKHB1Q9UF11 243 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 V9GYH0 126 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ANKRD11Q6UB99 2663 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR5H15A6NDH6 313 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 A6NIZ1 184 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 RGS5O15539 181 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 SLC16A7O60669 478 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 GPANK1O95872 356 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 RAP1BP61224 184 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 RAP1AP62834 184 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CRTC2Q53ET0 693 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TMEM225Q6GV28 225 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 CD200R1LQ6Q8B3 271 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 UEVLDQ8IX04 471 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 MDS2Q8NDY4 140 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 OR2B2Q9GZK3 357 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TSPAN10Q9H1Z9 355 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 ZNF703Q9H7S9 590 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 TRIM36Q9NQ86 728 aa17.59■□□□□ 0.41
TNFRSF1A-201ENST00000162749 IGLV1-36A0A0B4J1U3 117 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TVP23AA6NH52 213 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 J3QLW9 94 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MAGEB4O15481 346 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TRAF3IP2O43734 574 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZNF19P17023 458 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GABRA5P31644 462 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SDC2P34741 201 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 RFC3P40938 356 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ETFDHQ16134 617 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 WIPI1Q5MNZ9 446 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SLC16A9Q7RTY1 509 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KLHL15Q96M94 604 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 DCLRE1CQ96SD1 692 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 EMC6Q9BV81 110 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZNF552Q9H707 407 aaPredicted RBP17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 C14orf119Q9NWQ9 140 aa17.58■□□□□ 0.4
TNFRSF1A-201ENST00000162749 A0A0J9YW62 118 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SLC35F4A4IF30 521 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 E9PI62 339 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 H0YC42 278 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 BIDP55957 195 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CLDN20P56880 219 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ACTA2P62736 377 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ACTG2P63267 376 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CDONQ4KMG0 1287 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 FAM205BPQ63HN1 556 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 VASH1Q7L8A9 365 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KCTD7Q96MP8 289 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SFXN2Q96NB2 322 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 WDFY2Q96P53 400 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CCDC86Q9H6F5 360 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 WDR76Q9H967 626 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TMEM165Q9HC07 324 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SIRT4Q9Y6E7 314 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CDK2AP1O14519 115 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TNFSF11O14788 317 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SEC14L5O43304 696 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PTTG1O95997 202 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 HNRNPA0Q13151 305 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MFAP5Q13361 173 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TP53I3Q53FA7 332 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZMAT1Q5H9K5 638 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GDPD3Q7L5L3 318 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GALNTL5Q7Z4T8 443 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SYS1Q8N2H4 156 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 KCNE4Q8WWG9 221 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 OXGR1Q96P68 337 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MED18Q9BUE0 208 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MARCH7Q9H992 704 aa17.57■□□□□ 0.4
TNFRSF1A-201ENST00000162749 LOC102725191A0A1B0GVB3 256 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GJE1A6NN92 205 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 NME2P1O60361 137 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SP1P08047 785 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 NME2P22392 152 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 FGF9P31371 208 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CSNK2A1P68400 391 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 FMODQ06828 376 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CBX3Q13185 183 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZNF79Q15937 498 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GGNQ86UU5 652 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SNX33Q8WV41 574 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 FOXN4Q96NZ1 517 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CCDC32Q9BV29 185 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 TTTY12Q9BZ98 90 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 MIXL1Q9H2W2 232 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 POLHQ9Y253 713 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 SMIM30A4D0T7 59 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 PRR32B1ATL7 298 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 EIF1BO60739 113 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CRABP1P29762 137 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 RPS27P42677 84 aaKnown RBP17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 GFRA1P56159 465 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 RPTNQ6XPR3 784 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 DPY19L4Q7Z388 723 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 CDC20BQ86Y33 519 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 ZBTB8BQ8NAP8 495 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 OR6N2Q8NGY6 317 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 INTS14Q96SY0 518 aa17.56■□□□□ 0.4
TNFRSF1A-201ENST00000162749 RNF32Q9H0A6 362 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms