RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Arl5bQ9D4P0 179 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 PudpQ9D5U5 234 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Alg2Q9DBE8 415 aa19.08■□□□□ 0.65
Ccdc88a-202ENSMUST00000109477 Olfr619E9PV95 320 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn2r36K7N741 852 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 P06321 130 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 InaP46660 501 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Defa-rs7P50715 91 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Npepl1Q6NSR8 524 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Jazf1Q80ZQ5 243 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Slc16a12Q8BGC3 486 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Atp6v1g3Q8BMC1 118 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Nrn1lQ8C4W3 162 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Slc9a8Q8R4D1 576 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Q8VDP2 222 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmem123Q91Z22 195 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Fastkd2Q922E6 689 aaKnown RBP19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gkn3Q9D0T7 191 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Syt13Q9EQT6 426 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Trim39Q9ESN2 488 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gpc6Q9R087 555 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Skp2Q9Z0Z3 424 aa19.08■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ighv1-78A0A0G2JGN3 117 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr560A0A1B0GSU5 314 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr1247A2AT78 314 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Zar1lC3VD30 291 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm8237E9Q257 205 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn2r69G3XA45 850 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 MestQ07646 335 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Hp1bp3Q3TEA8 554 aaKnown RBP19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Cd47Q61735 303 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gpr176Q80WT4 515 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmem200aQ8C817 491 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Zbtb26Q8C8S0 451 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Zdhhc1Q8R0N9 484 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr215Q8VF82 310 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr558Q8VGZ7 317 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Dusp22Q99N11 184 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 CsQ9CZU6 464 aaKnown RBP19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Emc4Q9CZX9 183 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Arl13aQ9D416 372 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmem41aQ9D8U2 264 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Ptges3lQ9D9A7 131 aa19.07■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 A26c2A0A140LHE4 291 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm17949A0A1B0GRV7 212 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Fitm2P59266 262 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Btg2Q04211 158 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gdf3Q07104 366 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Bcl2l15Q08ED0 167 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 InipQ3TXT3 104 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Sema3bQ62177 748 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Kcnc3Q63959 769 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Trim45Q6PFY8 580 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr1286Q7TQY2 305 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 BtlaQ7TSA3 306 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Zfp418Q8BFS8 652 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Sdhaf4Q8BTE0 104 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tctn1Q8BZ64 593 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Micu2Q8CD10 432 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr98Q8VFD9 309 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Olfr821Q8VG45 310 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Slc22a7Q91WU2 540 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Mrps28Q9CY16 186 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmem179bQ9CY24 219 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Scamp2Q9ERN0 329 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Pde7bQ9QXQ1 446 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Plag1Q9QYE0 499 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Asic5Q9R0Y1 495 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Eif2s3xQ9Z0N1 472 aaKnown RBP19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Oasl2Q9Z2F2 508 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Spta1P08032 2415 aa19.06■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm21865A0A087WRL2 222 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 A0A286YDU1 74 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r137D3YTY1 307 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r143E9PUW9 307 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r157E9Q069 297 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r139E9Q8L6 297 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 2610001J05RikF2Z3Y9 59 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r112G3UY48 297 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm21800J3QMJ9 180 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm8660K7N6J2 305 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r135K9J7G0 307 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r125L7N227 307 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r116L7N2A6 307 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Klk1b1P00755 261 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Efnb1P52795 345 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Tmprss11cQ1JRP2 431 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Dmrtc1bQ2PMX6 267 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Dvl2Q60838 736 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Npr2Q6VVW5 1047 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm10283Q8C3L5 117 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Zbtb37Q8C3U9 504 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Elfn1Q8C8T7 828 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Gm5111Q8C9M4 190 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r23Q8R2D0 302 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 EcdQ9CS74 641 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Snapc3Q9D2C9 407 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Rnase10Q9D5A9 208 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 GabarapQ9DCD6 117 aa19.05■□□□□ 0.64
Ccdc88a-202ENSMUST00000109477 Vmn1r100Q9EPS5 307 aa19.05■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms