RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm45902Q3UDN3 361 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Mtmr11Q3V1L6 700 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Nox3Q672J9 568 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Alg8Q6P8H8 526 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr1229Q7TQZ9 311 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 BspryQ80YW5 473 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr1393Q8VFA7 311 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr807Q8VGI9 311 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr686Q8VGX3 317 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Asb16Q8VHS5 453 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 4933402D24RikQ9D4D3 167 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Nmrk2Q9D7C9 195 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 PgdQ9DCD0 483 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Acox1Q9R0H0 661 aaKnown RBP20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Col5a1O88207 1838 aa20.47■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gm13102A2ASJ3 519 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Lce6aD3YV94 81 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Krt83E9Q1Y9 479 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 P18524 117 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rpl18P35980 188 aaKnown RBP20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Crmp1P97427 572 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Foxd3Q61060 465 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Lefty1Q64280 368 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 SargQ8BI29 606 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Zbtb26Q8C8S0 451 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Nudt6Q8CH40 313 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Reep4Q8K072 257 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Fbxo45Q8K3B1 286 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Cacnb4Q8R0S4 519 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr1461Q8VEV7 312 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr108Q8VFA1 320 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr668Q8VGW3 318 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Dusp22Q99N11 184 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 NubplQ9CWD8 319 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Actl11Q9D5V1 1207 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Chrm3Q9ERZ3 589 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Isg20Q9JL16 300 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Rgs6Q9Z2H2 472 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr1193A2AV13 318 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr1145A2AVC7 325 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r137D3YTY1 307 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r143E9PUW9 307 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn2r106E9PY92 862 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr592E9PYB3 312 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r157E9Q069 297 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r139E9Q8L6 297 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Gm16506F7ANP4 213 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r112G3UY48 297 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r120K7N6J6 305 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r135K9J7G0 307 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r125L7N227 307 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r116L7N2A6 307 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Zfand5O88878 213 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Ighg1P01869 393 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Sox3P53784 375 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Mier2Q3U3N0 541 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Dvl3Q61062 716 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Ptp4a1Q63739 173 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tbr1Q64336 681 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Tmem158Q6F5E0 286 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Nudt15Q8BG93 170 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 TifabQ8JZM6 147 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Olfr340Q8VGL0 312 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Fmo4Q8VHG0 560 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Vmn1r100Q9EPS5 307 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 Aqp9Q9JJJ3 295 aa20.46■□□□□ 0.87
Scn1b-201ENSMUST00000098548 SpenQ62504 3644 aaKnown RBP20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fnd3c2A2AP83 941 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Macc1E9PXX8 851 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm20518E9Q548 580 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Anxa3O35639 323 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Efnb1P52795 345 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Crybb2P62696 205 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gch1Q05915 241 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 AI987944Q7TPX5 406 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Jazf1Q80ZQ5 243 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Emc1Q8C7X2 997 aaKnown RBP20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fam110aQ8R184 296 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Tspan10Q8VCF5 331 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr922Q8VG50 311 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr51Q8VGG9 307 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Ceacam20Q9D2Z1 577 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Slc6a19Q9D687 634 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Slc48a1Q9D8M3 146 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Vmn1r53Q9EP93 310 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fn3kQ9ER35 309 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Scamp2Q9ERN0 329 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Creb3l1Q9Z125 519 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm884A2A9H6 3643 aa20.45■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Zfp534A2A7A1 661 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm20489A2AGH5 449 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Olfr1360K9J6X0 313 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Gm3239L7N2D9 227 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Mknk1O08605 427 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Hsd3b2P26149 373 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Lad1P57016 528 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 InhbbQ04999 411 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Isg20l2Q3U1G5 368 aaKnown RBP20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Slc35a1Q61420 336 aa20.44■□□□□ 0.86
Scn1b-201ENSMUST00000098548 Fblim1Q71FD7 375 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms