RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Olfr3Q60879 313 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fam212bQ80VY2 300 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Wdtc1Q80ZK9 677 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slco3a1Q8R3L5 710 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Htra4A2RT60 483 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ephb6O08644 1014 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Prkar2aP12367 401 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 AgrpP56473 131 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cdh26P59862 763 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hist1h3bP84228 136 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr32Q7TQZ0 308 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Srpx2Q8R054 468 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr734Q8VFT4 313 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr979Q8VH10 311 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Xylt2Q9EPL0 865 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Jag2Q9QYE5 1247 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr155Q9QZ22 319 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lhx6Q9R1R0 363 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Wif1Q9WUA1 379 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ifna7P06799 190 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lgals3P16110 264 aaKnown RBP11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cln3Q61124 438 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Babam2Q8K3W0 383 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 NotumQ8R116 503 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Plpp7Q91WB2 271 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 B3GNT2Q9Z222 397 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Usp36B1AQJ2 1098 aaKnown RBP11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cdc20bD3Z3I0 519 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 CdonQ32MD9 1250 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem198bQ8CFU0 350 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1132Q8VG97 308 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc7a9Q9QXA6 487 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 PikfyveQ9Z1T6 2097 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm15056F6ZR08 88 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Meig1Q61845 88 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Taf9bQ6NZA9 249 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 B630019K06RikQ7TNS5 333 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Clint1Q99KN9 631 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Bcl3Q9Z2F6 448 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1034A0A1L1ST14 310 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp870J3QMA4 560 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Sstr4P49660 385 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nme2Q01768 152 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Psg28Q4KL66 472 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Osgin1Q8VC10 478 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem269Q9D4Y8 254 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nkx2-4Q9EQM3 354 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 St6galnac5Q9QYJ1 336 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 MvkQ9R008 395 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Syt7Q9R0N7 403 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm10718D3Z1I7 227 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm17669F6QL70 154 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gpr55Q3UJF0 327 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 DgkzQ80UP3 929 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem150bQ8R218 238 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr156Q8VGA9 318 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Plekhf2Q91WB4 249 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tas2r103Q9JKA3 312 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Wdr54Q9R0D8 334 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tagln2Q9WVA4 199 aaKnown RBP11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 RbpmsQ9WVB0 197 aaKnown RBP11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Elavl2Q60899 360 aaKnown RBP11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 DbpQ60925 325 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mboat2Q8R3I2 519 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr668Q8VGW3 318 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 EsamQ925F2 394 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tppp3Q9CRB6 176 aaKnown RBP11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hacd4A2AKM2 232 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hoxc5P32043 222 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Kcnk2P97438 426 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Rasl2-9Q61820 216 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Neil1Q8K4Q6 389 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr434Q8VF17 321 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr47Q8VF18 321 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1054Q8VGS7 312 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ms4a4dQ99N05 225 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ndufa6Q9CQZ5 131 aaKnown RBP11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 RictorQ6QI06 1708 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm17655A0A1B0GT13 591 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr427E9Q7E7 315 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm20828J3KMI7 228 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hbq1bQ3U0A6 142 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pex11gQ6P6M5 241 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ip6k1Q6PD10 433 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Scml4Q80VG1 408 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 PigmQ8C2R7 423 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm9999Q8C5Y2 53 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm17067E9Q6S4 354 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 CgaP01216 120 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Klk1b8P07628 261 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 ApcsP12246 224 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hoxc13P50207 328 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hoxb13P70321 286 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Trim46Q7TNM2 759 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr657Q7TRP7 319 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Igsf5Q7TSN7 370 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Kiaa1456Q80WQ4 447 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 4921517D22RikQ8CET0 269 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mrps24Q9CQV5 167 aa11.11□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gng12Q9DAS9 72 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms