RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 FAM26EQ8N5C1 309 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 TCEANCQ8N8B7 351 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF610Q8N9Z0 462 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 SYT14Q8NB59 555 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 SDR9C7Q8NEX9 313 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 NOXO1Q8NFA2 376 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 OR8J1Q8NGP2 316 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 PTP4A1Q93096 173 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 MCHR2Q969V1 340 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 NMD3Q96D46 503 aaKnown RBP10.88□□□□□ -0.67
LINC00339-213ENST00000642137 APOL4Q9BPW4 351 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 SLC7A10Q9NS82 523 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 PRSS50Q9UI38 385 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 RAB26Q9ULW5 256 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 FKBP7Q9Y680 259 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 HSPE1-MOB4S4R3N1 261 aa10.88□□□□□ -0.67
LINC00339-213ENST00000642137 NCOA6Q14686 2063 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-213ENST00000642137 A8MXE2 369 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 PRR23D1E9PI22 279 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 TLX2O43763 284 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 PRKYO43930 277 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 KRT33AO76009 404 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 PRR23D2P0DMB1 279 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 AGAP20933 346 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 BMP5P22003 454 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 PAICSP22234 425 aaKnown RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 CRABP1P29762 137 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 CHRNB4P30926 498 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 SLC25A1P53007 311 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 SNRPGP62308 76 aaKnown RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 CD47Q08722 323 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 CRMP1Q14194 572 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 SLC25A30Q5SVS4 291 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 C10orf128Q5T292 105 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 XKRXQ6PP77 449 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 Q6ZT83 130 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 USP51Q70EK9 711 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 MRGPRGQ86SM5 289 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 LIX1LQ8IVB5 337 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 CPOQ8IVL8 374 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 UBE2J2Q8N2K1 259 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 SETD9Q8NE22 299 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 LILRB4Q8NHJ6 448 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 RHOXF1Q8NHV9 184 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 FAM81AQ8TBF8 368 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 TMEM163Q8TC26 289 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF184Q99676 751 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 ULBP2Q9BZM5 246 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 NMNAT2Q9BZQ4 307 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 NUAK2Q9H093 628 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 GPR35Q9HC97 309 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 SRA1Q9HD15 236 aaKnown RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 ASB6Q9NWX5 421 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 IMPAD1Q9NX62 359 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF226Q9NYT6 803 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 JKAMPQ9P055 326 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 H2AFY2Q9P0M6 372 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-213ENST00000642137 B9D1Q9UPM9 204 aa10.87□□□□□ -0.67
LINC00339-213ENST00000642137 H7C1C5 153 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 M0R3G1 203 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 DHHO43323 396 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 SLC16A7O60669 478 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 KHDRBS3O75525 346 aaKnown RBP10.86□□□□□ -0.67
LINC00339-213ENST00000642137 SMNDC1O75940 238 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC00339-213ENST00000642137 GABRB1P18505 474 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 MPGP29372 298 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 CENPAP49450 140 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 ISL1P61371 349 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 LCN6P62502 163 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 LGALS3BPQ08380 585 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 FAPQ12884 760 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 OCLNQ16625 522 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 SLC25A35Q3KQZ1 300 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 C6orf52Q5T4I8 152 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 MEDAGQ5VYS4 303 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 DNM1P34Q6PK57 102 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 CXXC5Q7LFL8 322 aaKnown RBP10.86□□□□□ -0.67
LINC00339-213ENST00000642137 ZBTB46Q86UZ6 589 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 ENTHD1Q8IYW4 607 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 OR6V1Q8N148 313 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 CYB561A3Q8NBI2 242 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 OR2T4Q8NH00 348 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 MUS81Q96NY9 551 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 IL4I1Q96RQ9 567 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 OPN3Q9H1Y3 402 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-213ENST00000642137 SYT4Q9H2B2 425 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 HINT3Q9NQE9 182 aaKnown RBP10.86□□□□□ -0.67
LINC00339-213ENST00000642137 RPRD1BQ9NQG5 326 aaKnown RBP10.86□□□□□ -0.67
LINC00339-213ENST00000642137 MALT1Q9UDY8 824 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 MOKQ9UQ07 419 aa10.86□□□□□ -0.67
LINC00339-213ENST00000642137 FAM208BQ5VWN6 2430 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 PRRC2CQ9Y520 2896 aaKnown RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 IGKV1D-43A0A0B4J1Z2 117 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF587BE7ETH6 402 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
LINC00339-213ENST00000642137 CLIC3O95833 236 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 IGHV3-9P01782 118 aa10.85□□□□□ -0.67
LINC00339-213ENST00000642137 ZNF84P51523 738 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms