RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	CD40	P25942	277 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	ACVR1B	P36896	505 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	TUBA1B	P68363	451 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	TUBA4A	P68366	448 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	MYBPC1	Q00872	1141 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	RUNX1T1	Q06455	604 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	FHL1	Q13642	323 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	CCDC121	Q6ZUS5	278 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	TUBA1A	Q71U36	451 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	ADGRG5	Q8IZF4	528 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	LRRC75A	Q8NAA5	344 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	FNDC8	Q8TC99	324 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	ALG12	Q9BV10	488 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	MRPL13	Q9BYD1	178 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	POU2F3	Q9UKI9	436 aa		13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	ZNF346	Q9UL40	294 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.84	□□□□□ -0.19
SPIN3-233	ENST00000640039	XKRY	O14609	159 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	CCNB2	O95067	398 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	FARS2	O95363	451 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	FPR3	P25089	353 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	HMGA2	P52926	109 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	IST1	P53990	364 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	CDH11	P55287	796 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	RIPPLY3	P57055	190 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	ERVK-25	P63136	954 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	LRFN4	Q6PJG9	635 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC22A25	Q6T423	547 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZER1	Q7Z7L7	766 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	KBTBD8	Q8NFY9	601 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	FANK1	Q8TC84	345 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	GNPDA2	Q8TDQ7	276 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	CANT1	Q8WVQ1	401 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	HDAC2	Q92769	488 aa	Known RBP	13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	FBXW5	Q969U6	566 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	MCHR2	Q969V1	340 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF570	Q96NI8	536 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC38A2	Q96QD8	506 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	TSPAN32	Q96QS1	320 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	RBP7	Q96R05	134 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	CCL19	Q99731	98 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	CHID1	Q9BWS9	393 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	LRMDA	Q9H2I8	198 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	YY1AP1	Q9H869	796 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC7A8	Q9UHI5	535 aa		13.83	□□□□□ -0.2
SPIN3-233	ENST00000640039	GNGT2	O14610	69 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	ARHGEF9	O43307	516 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	PTP4A3	O75365	173 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	ATE1	O95260	518 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	CST1	P01037	141 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	OR8G3P	P0DMU2	310 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	CD79A	P11912	226 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	HIST3H3	Q16695	136 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF672	Q499Z4	452 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	GPR139	Q6DWJ6	353 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	PGBD2	Q6P3X8	592 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	SMARCD3	Q6STE5	483 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF627	Q7L945	461 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	ARIH2OS	Q8N7S6	290 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF519	Q8TB69	540 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	PIGT	Q969N2	578 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	GPX7	Q96SL4	187 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	KCNK17	Q96T54	332 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	SMURF2	Q9HAU4	748 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	TMEM38B	Q9NVV0	291 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	ADAM18	Q9Y3Q7	739 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039		U3KQV3	271 aa		13.82	□□□□□ -0.2
SPIN3-233	ENST00000640039	AKAP6	Q13023	2319 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	SHISA9	B4DS77	424 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	UBL3	O95164	117 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	HLA-H	P01893	362 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	CBR1	P16152	277 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	CD53	P19397	219 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	SDHA	P31040	664 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC6A6	P31641	620 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	ARR3	P36575	388 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	GUCA1A	P43080	201 aa	Predicted RBP	13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	RPS6KA3	P51812	740 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	SPOCK1	Q08629	439 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	NPRL3	Q12980	569 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	TSPAN31	Q12999	210 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	GK3P	Q14409	553 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	GSG1	Q2KHT4	349 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	C3orf36	Q3SXR2	165 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	THEM4	Q5T1C6	240 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	C10orf128	Q5T292	105 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	C1orf94	Q6P1W5	598 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	SPNS3	Q6ZMD2	512 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	DPY19L2P2	Q6ZN68	376 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	SLC22A24	Q8N4F4	322 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	ZNF611	Q8N823	705 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	FAM169B	Q8N8A8	192 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	OR9Q2	Q8NGE9	314 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	OR4C15	Q8NGM1	316 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	NSMAF	Q92636	917 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039		Q96M85	177 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	GPA33	Q99795	319 aa		13.81	□□□□□ -0.2
SPIN3-233	ENST00000640039	OR52D1	Q9H346	318 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms