RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 OXTP01178 125 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 IGHMP01871 453 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 COL4A2P08572 1712 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CCDC130P13994 396 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 VCLP18206 1134 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 IL11P20809 199 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 SSTR5P35346 364 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CEACAM6P40199 344 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CHI3L2Q15782 390 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CST6Q15828 149 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CCDC92Q53HC0 331 aaPredicted RBP-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 MPV17L2Q567V2 206 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 SPATA1Q5VX52 437 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CCDC70Q6NSX1 233 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 B3GLCTQ6Y288 498 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 PGAP1Q75T13 922 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 PAGE2Q7Z2X7 111 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 TPRA1Q86W33 373 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 C2orf73Q8N5S3 287 aaPredicted RBP-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 EIF4E3Q8N5X7 224 aaKnown RBP-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 NAT8LQ8N9F0 302 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 OR4C13Q8NGP0 309 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 ZNF606Q8WXB4 792 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 MR1Q95460 341 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 RAB3IPQ96QF0 476 aaPredicted RBP-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 TIMM17AQ99595 171 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 NAP1L4Q99733 375 aaKnown RBP-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CBWD1Q9BRT8 395 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 RSG1Q9BU20 258 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 TRPV5Q9NQA5 729 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 NUDT15Q9NV35 164 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 CALYQ9NYX4 217 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 TMOD2Q9NZR1 351 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 ANAPC5Q9UJX4 755 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 ZNF490Q9ULM2 529 aaPredicted RBP-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 PACSIN2Q9UNF0 486 aaPredicted RBP-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 C22orf24Q9Y442 160 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 ATP6V0A2Q9Y487 856 aa-1.19□□□□□ -2.6
LMBR1-222ENST00000638959 A0A0U1RQG5 324 aaPredicted RBP-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 LOC110117498-PIK3R3F6TDL0 507 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 NME2P1O60361 137 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 F10P00742 488 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 LGALS2P05162 132 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 YWHABP31946 246 aaKnown RBP-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 MAGEA12P43365 314 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 NUMBP49757 651 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SERPINH1P50454 418 aaKnown RBP-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 DAP3P51398 398 aaKnown RBP-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 CCR8P51685 355 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 FOXA1P55317 472 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 HSD17B7P56937 341 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 CUL2Q13617 745 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SIM2Q14190 667 aaPredicted RBP-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 DMC1Q14565 340 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SLC25A52Q3SY17 297 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 FAM131AQ6UXB0 335 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 PLA2G4DQ86XP0 818 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 TUSC5Q8IXB3 177 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 LINC00469Q8N7U9 141 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 OR5T1Q8NG75 326 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SLC2A14Q8TDB8 520 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SDR42E1Q8WUS8 393 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 GPR82Q96P67 336 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 ODF3Q96PU9 254 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SLC30A2Q9BRI3 323 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 NACA2Q9H009 215 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 CYSTM1Q9H1C7 97 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 WDR76Q9H967 626 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 POPDC2Q9HBU9 364 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SEPT10Q9P0V9 454 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 BCAP29Q9UHQ4 241 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 KIAA1257Q9ULG3 409 aa-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 RPRD2Q5VT52 1461 aaKnown RBP-1.2□□□□□ -2.6
LMBR1-222ENST00000638959 SSH2Q76I76 1423 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ERICH4A6NGS2 130 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 CACNB4O00305 520 aaPredicted RBP-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ZNF208O43345 1280 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 IL9P15248 144 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ZNF708P17019 499 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 OR1G1P47890 313 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 RAD23AP54725 363 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 TCP10Q12799 353 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ORMDL2Q53FV1 153 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 LIN9Q5TKA1 542 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 PRAMEF8Q5VWM4 474 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 CNIH2Q6PI25 160 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 DEGS2Q6QHC5 323 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 SBSPONQ8IVN8 264 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 CDH26Q8IXH8 852 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 LRRC17Q8N6Y2 441 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ZNF713Q8N859 430 aaPredicted RBP-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 ATP6V0D2Q8N8Y2 350 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 C19orf18Q8NEA5 215 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 OR7G3Q8NG95 312 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 PIFOQ8TCI5 191 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 PNPT1Q8TCS8 783 aaKnown RBP-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 CORO2AQ92828 525 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 MRPL45Q9BRJ2 306 aaKnown RBP-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 MARVELD1Q9BSK0 173 aa-1.21□□□□□ -2.6
LMBR1-222ENST00000638959 DESI2Q9BSY9 194 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms