RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 PEX12O00623 359 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TSPAN4O14817 238 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 P2RX6O15547 441 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 LATO43561 262 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 PLRG1O43660 514 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 DXOO77932 396 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 AQP8O94778 261 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TOXO94900 526 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 RPP14O95059 124 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 HLA-DQA2P01906 255 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 GYPBP06028 91 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 CD14P08571 375 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 HIST1H1CP16403 213 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TBXA2RP21731 343 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SLC2A5P22732 501 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 HTR2AP28223 471 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 IGFALSP35858 605 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 LSSP48449 732 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 DNASE1L1P49184 302 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 AGFG1P52594 562 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 ARF3P61204 181 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SEC61A1P61619 476 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 YPEL5P62699 121 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 DUSP2Q05923 314 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 LTBQ06643 244 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 PUDPQ08623 228 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 CAMK2DQ13557 499 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 C21orf62-AS1Q17RA5 79 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 ALG11Q2TAA5 492 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 PCGF3Q3KNV8 242 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 ALG10Q5BKT4 473 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 FAM27D1Q5T7N8 215 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM205Q6UW68 189 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 RPTNQ6XPR3 784 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 C17orf47Q8NEP4 570 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 NAT6Q93015 286 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 PTP4A1Q93096 173 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 KISS1RQ969F8 398 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SIPA1Q96FS4 1042 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SFXN2Q96NB2 322 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF587Q96SQ5 575 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 DDOQ99489 341 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SLC25A18Q9H1K4 315 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 LIN7BQ9HAP6 207 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 MCCC2Q9HCC0 563 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 STEAP1Q9UHE8 339 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SIRT4Q9Y6E7 314 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 NPIPA5A0A0B4J1W7 369 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SHISA3A0PJX4 238 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 METTL21EPA6NDL7 271 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 OR5K3A6NET4 321 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 OR6C65A6NJZ3 312 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 E9PI62 339 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 NPIPA7E9PJI5 369 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 GNB5O14775 395 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 LANCL1O43813 399 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 GALR3O60755 368 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 GOSR1O95249 250 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 IGF2P01344 180 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 WNT1P04628 370 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 NPIPA8P0DM63 369 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 ICAM2P13598 275 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 CTSEP14091 401 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 HNRNPA2B1P22626 353 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 GALNSP34059 522 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 DRD3P35462 400 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 BLKP51451 505 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 CLDN2P57739 230 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TAS2R19P59542 299 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TAS2R20P59543 309 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 EIF5AP63241 154 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 EGR3Q06889 387 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 DLX2Q07687 328 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 RUNX2Q13950 521 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 MEF2DQ14814 521 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 EXOSC7Q15024 291 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF141Q15928 474 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SGCAQ16586 387 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TRMT12Q53H54 448 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 CLVS2Q5SYC1 327 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SLC18B1Q6NT16 456 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 LYPD8Q6UX82 237 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 UNQ9370/PRO34162Q6UXP9 181 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 GSG1LQ6UXU4 331 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 THSD4Q6ZMP0 1018 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 BEST4Q8NFU0 473 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 OR6N2Q8NGY6 317 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 FGF13Q92913 245 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 LCORQ96JN0 433 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 INTS14Q96SY0 518 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SLC25A21Q9BQT8 299 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 TTTY10Q9BZA0 68 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 C20orf141Q9NUB4 165 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 HRASLS2Q9NWW9 162 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 SDHAF2Q9NX18 166 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 MRPL15Q9P015 296 aaKnown RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 KCMF1Q9P0J7 381 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 FOXJ3Q9UPW0 622 aa3.63□□□□□ -1.83
SCN1A-214ENST00000637038 PCYT1BQ9Y5K3 369 aaPredicted RBP3.63□□□□□ -1.83
SCN1A-214ENST00000637038 A0A0A6YYH2 397 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms