RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SIRPB2Q5JXA9 342 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 SPATA46Q5T0L3 261 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TPTE2P1Q5T6R2 138 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 PHF19Q5T6S3 580 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 HENMT1Q5T8I9 393 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 FBXW9Q5XUX1 488 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM198Q66K66 360 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF57Q68EA5 555 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 H3F3CQ6NXT2 135 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 GDF7Q7Z4P5 450 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ABI3BPQ7Z7G0 1075 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 CBLN2Q8IUK8 224 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM251Q8N6I4 163 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ACBD7Q8N6N7 88 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 BEST4Q8NFU0 473 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ASB10Q8WXI3 467 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 PIK3IP1Q96FE7 263 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 SNX22Q96L94 193 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF582Q96NG8 517 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 GREM2Q9H772 168 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 MED9Q9NWA0 146 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 CLN6Q9NWW5 311 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 CCDC167Q9P0B6 97 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 EXOSC1Q9Y3B2 195 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNFX1Q9P2E3 1918 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 GLYATL1P3A0A0U1RQE8 302 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 HMGB3O15347 200 aaKnown RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 B3GAT3O94766 335 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 OR2F2O95006 317 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 RAP2AP10114 183 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ARSAP15289 507 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 HMGCS2P54868 508 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 WNT7BP56706 349 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM33P57088 247 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMPRSS3P57727 454 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF415Q09FC8 603 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 CDK5R2Q13319 367 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 CRHR2Q13324 411 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ABRAXAS2Q15018 415 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TNXAQ16473 311 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 STEAP4Q687X5 459 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM211Q6ICI0 200 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 C8orf82Q6P1X6 216 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM182Q6ZP80 229 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 FTMTQ8N4E7 242 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 RNF152Q8N8N0 203 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF439Q8NDP4 499 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 BVESQ8NE79 360 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 LCORQ96JN0 433 aaPredicted RBP3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM209Q96SK2 561 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 CDCA4Q9BXL8 241 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TMPRSS13Q9BYE2 586 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ALOXE3Q9BYJ1 711 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 TPSD1Q9BZJ3 242 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 WDR54Q9H977 334 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ACOT13Q9NPJ3 140 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 B3GAT2Q9NPZ5 323 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF358Q9NW07 568 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 GPATCH2Q9NW75 528 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 HAO2Q9NYQ3 351 aa3.57□□□□□ -1.84
R3HDM1-220ENST00000628915 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 FITM1A5D6W6 292 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 NPIPB13A6NJU9 1138 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 YDJCA8MPS7 323 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 B4DXG7 233 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 NPIPB4C9JG80 1138 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 G3V2L1 256 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 M0QZ24 198 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 FAM20BO75063 409 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 LSM8O95777 96 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 MT-ND1P03886 318 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ICAM1P05362 532 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ANXA2P07355 339 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 OR56A5P0C7T3 313 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PGCP20142 388 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 EPHA1P21709 976 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 HRH2P25021 359 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ARRB2P32121 409 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 CSF2RBP32927 897 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ARL4AP40617 200 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ERVPABLB-1P60509 514 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ISL1P61371 349 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PPP2CBP62714 309 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PPP2CAP67775 309 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 MXD1Q05195 221 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ANKRD55Q3KP44 614 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 HECTD2Q5U5R9 776 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SDHAF4Q5VUM1 108 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SUSD4Q5VX71 490 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 CES5AQ6NT32 575 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF620Q6ZNG0 422 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 FAM183BPQ6ZVS7 135 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PIGZQ86VD9 579 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 WFDC8Q8IUA0 241 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 MFSD6LQ8IWD5 586 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PELI3Q8N2H9 469 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM130Q8N3G9 435 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 OR4K2Q8NGD2 314 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 OR4P4Q8NGL7 312 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 OR9I1Q8NGQ6 314 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms