RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 GUCA2AQ02747 115 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ZMYND11Q15326 602 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 C4orf46Q504U0 113 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 FAM69AQ5T7M9 428 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 LIN54Q6MZP7 749 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 DPY19L2P2Q6ZN68 376 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ABHD12BQ7Z5M8 362 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 TNFAIP8L1Q8WVP5 186 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 LANCL2Q9NS86 450 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 COQ3Q9NZJ6 369 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 LUZP4Q9P127 313 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ASH2LQ9UBL3 628 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 LSM2Q9Y333 95 aaKnown RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 PTPRSQ13332 1948 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 KIAA1671Q9BY89 1806 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 NCOR2Q9Y618 2525 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 TRDV1A0A1B0GX56 115 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ARRDC5A6NEK1 342 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 DDAH2O95865 285 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 DHFRP00374 187 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 EFNA3P52797 238 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 GLO1Q04760 184 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 SELENBP1Q13228 472 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 NR2C2APQ86WQ0 139 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 SIAH3Q8IW03 269 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 OR14A16Q8NHC5 309 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 NR4A3Q92570 626 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ZNF501Q96CX3 271 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 S100A16Q96FQ6 103 aaKnown RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 KLHL15Q96M94 604 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ATF6BQ99941 703 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 LMF2Q9BU23 707 aaKnown RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 SRRQ9GZT4 340 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 IRF2BPLQ9H1B7 796 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 RNF121Q9H920 327 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 TBC1D24Q9ULP9 559 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 DPM1O60762 260 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 KDM4BO94953 1096 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SIX6O95475 246 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ITGA5P08648 1049 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 OR2T7P0C7T2 308 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 GTF2F2P13984 249 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 VAMP1P23763 118 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 DIO1P49895 249 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 RIDAP52758 137 aaKnown RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 ACTA2P62736 377 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ACTG2P63267 376 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 PUDPQ08623 228 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 FUT7Q11130 342 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 MESTQ5EB52 335 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 XKRXQ6PP77 449 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ZNF782Q6ZMW2 699 aaPredicted RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 CCDC190Q86UF4 302 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 MS4A15Q8N5U1 240 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 NPEPL1Q8NDH3 523 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 CADM4Q8NFZ8 388 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 OR2T27Q8NH04 317 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ZNF721Q8TF20 911 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 S100A13Q99584 98 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SARGQ9BW04 601 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 CHRNA9Q9UGM1 479 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SRPK3Q9UPE1 567 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ALG5Q9Y673 324 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 COL4A4P53420 1690 aaPredicted RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 ATRXP46100 2492 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 MGAQ8IWI9 3026 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 MEX3AA1L020 520 aaKnown RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 NPIPA2E9PIF3 369 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 NPIPA3F8WFD2 350 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 IL33O95760 270 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SERPINA3P01011 423 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 DPP4P27487 766 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SDHAP31040 664 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 PLGLB1Q02325 96 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 EGR4Q05215 589 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 EFR3AQ14156 821 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SLC22A6Q4U2R8 563 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 KLHL26Q53HC5 615 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 NKAPLQ5M9Q1 402 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 GLYATL3Q5SZD4 288 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ATAD3CQ5T2N8 411 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SLC18B1Q6NT16 456 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 COX15Q7KZN9 410 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 CPEB2Q7Z5Q1 589 aaKnown RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 ESX1Q8N693 406 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 OR10K1Q8NGX5 313 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 PPP1R14BQ96C90 147 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 UBL7Q96S82 380 aaPredicted RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 PELOQ9BRX2 385 aaKnown RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 DUSP23Q9BVJ7 150 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 HOXD1Q9GZZ0 328 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 FGF20Q9NP95 211 aaPredicted RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 ZNF223Q9UK11 482 aaPredicted RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 SLC5A6Q9Y289 635 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 V9GY05 133 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ARPC1BO15143 372 aaKnown RBP6.78□□□□□ -1.32
PKP4-217ENST00000628904 GLCEO94923 617 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 ARFIP1P53367 373 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 SKP2Q13309 424 aa6.78□□□□□ -1.32
PKP4-217ENST00000628904 PDCD1Q15116 288 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms