RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 SELENBP1Q13228 472 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 CDCP2Q5VXM1 449 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 FDX2Q6P4F2 183 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 SLC35D2Q76EJ3 337 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 PPP1R32Q7Z5V6 425 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 ZNF454Q8N9F8 522 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 DRAXINQ8NBI3 349 aaPredicted RBP19.81■□□□□ 0.76
PNKP-220ENST00000627232 PAQR8Q8TEZ7 354 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 C5orf34Q96MH7 638 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 KCNK17Q96T54 332 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.81■□□□□ 0.76
PNKP-220ENST00000627232 SH2D2AQ9NP31 389 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 MRPL22Q9NWU5 206 aaKnown RBP19.81■□□□□ 0.76
PNKP-220ENST00000627232 TCFL5Q9UL49 500 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 RASD1Q9Y272 281 aa19.81■□□□□ 0.76
PNKP-220ENST00000627232 ARPC4-TTLL3A0A0A6YYG9 625 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 A0A1W2PQ09 198 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 TMEM127O75204 238 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 ZFPL1O95159 310 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 GPANK1O95872 356 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 IFNGR1P15260 489 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 APEX1P27695 318 aaKnown RBP19.8■□□□□ 0.76
PNKP-220ENST00000627232 GLO1Q04760 184 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 CHAF1BQ13112 559 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 ASAH1Q13510 395 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 INPP5JQ15735 1006 aaPredicted RBP19.8■□□□□ 0.76
PNKP-220ENST00000627232 SLC18B1Q6NT16 456 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 CADM3Q8N126 398 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 OR5AK2Q8NH90 309 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 CT55Q8WUE5 264 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 OR8B4Q96RC9 309 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 NEURL2Q9BR09 285 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 SPRY4Q9C004 299 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 ABRACLQ9P1F3 81 aa19.8■□□□□ 0.76
PNKP-220ENST00000627232 RPH3AQ9Y2J0 694 aaPredicted RBP19.8■□□□□ 0.76
PNKP-220ENST00000627232 EML6Q6ZMW3 1958 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 KMT2EQ8IZD2 1858 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 FAM25AB3EWG3 89 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 FAM25CB3EWG5 89 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 FAM25GB3EWG6 89 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 PDCD5O14737 125 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 RPP14O95059 124 aaKnown RBP19.79■□□□□ 0.76
PNKP-220ENST00000627232 HLA-DQB1P01920 261 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 SPNP16150 400 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 ELK1P19419 428 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 PTGS2P35354 604 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 POU3F1Q03052 451 aaPredicted RBP19.79■□□□□ 0.76
PNKP-220ENST00000627232 SSPNQ14714 243 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 ZNF239Q16600 458 aaKnown RBP19.79■□□□□ 0.76
PNKP-220ENST00000627232 CEP78Q5JTW2 689 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 PRAMEF20Q5VT98 475 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 CCBE1Q6UXH8 406 aaPredicted RBP19.79■□□□□ 0.76
PNKP-220ENST00000627232 KDM8Q8N371 416 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 RGP1Q92546 391 aaPredicted RBP19.79■□□□□ 0.76
PNKP-220ENST00000627232 TSPAN10Q9H1Z9 355 aaPredicted RBP19.79■□□□□ 0.76
PNKP-220ENST00000627232 CYSLTR2Q9NS75 346 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 FRRS1LQ9P0K9 344 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 PISDQ9UG56 409 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 KCNG2Q9UJ96 466 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 HDGFL3Q9Y3E1 203 aa19.79■□□□□ 0.76
PNKP-220ENST00000627232 SNPHO15079 494 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 HPP00738 406 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 JMJD7P0C870 316 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 PSKH1P11801 424 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 TCN2P20062 427 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 MAPK3P27361 379 aaPredicted RBP19.78■□□□□ 0.76
PNKP-220ENST00000627232 ROM1Q03395 351 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 RASGEF1BQ0VAM2 473 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 IL18Q14116 193 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 SLC25A35Q3KQZ1 300 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 SLC22A10Q63ZE4 541 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 NHLRC1Q6VVB1 395 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 TIPARPQ7Z3E1 657 aaKnown RBP19.78■□□□□ 0.76
PNKP-220ENST00000627232 TMEM156Q8N614 296 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 OR2G2Q8NGZ5 317 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 NSMAFQ92636 917 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 RELTQ969Z4 430 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 DERL3Q96Q80 235 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 NOX4Q9NPH5 578 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 SLCO1C1Q9NYB5 712 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 KLHL13Q9P2N7 655 aa19.78■□□□□ 0.76
PNKP-220ENST00000627232 TRBV5-5A0A0J9YX44 114 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 TMEM212A6NML5 194 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 OR4C45A6NMZ5 311 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 PIN1P1O15428 100 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 KHDRBS3O75525 346 aaKnown RBP19.77■□□□□ 0.76
PNKP-220ENST00000627232 ZNF806P0C7X5 589 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 EPXP11678 715 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 SRMP19623 302 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 NPR2P20594 1047 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 SLC17A1Q14916 467 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 Q499Y3 187 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 KCTD18Q6PI47 426 aaPredicted RBP19.77■□□□□ 0.76
PNKP-220ENST00000627232 ZNF679Q8IYX0 411 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 GTPBP8Q8N3Z3 284 aaPredicted RBP19.77■□□□□ 0.76
PNKP-220ENST00000627232 TRMT10AQ8TBZ6 339 aaKnown RBP19.77■□□□□ 0.76
PNKP-220ENST00000627232 HSD17B8Q92506 261 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 DCBLD2Q96PD2 775 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 CDC6Q99741 560 aa19.77■□□□□ 0.76
PNKP-220ENST00000627232 COMMD4Q9H0A8 199 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms