RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 SRP14P37108 136 aaKnown RBP10.26□□□□□ -0.77
UPF3B-204ENST00000619445 RBM34P42696 430 aaKnown RBP10.26□□□□□ -0.77
UPF3B-204ENST00000619445 GPR6P46095 362 aaPredicted RBP10.26□□□□□ -0.77
UPF3B-204ENST00000619445 PLP2Q04941 152 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 NFYCQ13952 458 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 PCGF3Q3KNV8 242 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 FAM209AQ5JX71 171 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 CCDC80Q76M96 950 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 C1orf174Q8IYL3 243 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 SNX33Q8WV41 574 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 SNX18Q96RF0 628 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 C19orf24Q9BVV8 132 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 BCL2L14Q9BZR8 327 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 KCNN2Q9H2S1 579 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 CDH20Q9HBT6 801 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 TMEM38BQ9NVV0 291 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 SLCO1C1Q9NYB5 712 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 SLC7A7Q9UM01 511 aa10.26□□□□□ -0.77
UPF3B-204ENST00000619445 A0A0A6YYJ9 748 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 IQCMA0A1B0GVH7 501 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 A0A1W2PPW3 197 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 LRP5LA4QPB2 252 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 NPIPB13A6NJU9 1138 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 NPIPB4C9JG80 1138 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 MCIDASD6RGH6 385 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 LRRN3E7EW58 273 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 TCF21O43680 179 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 ASAH2BP0C7U1 165 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 THRBP10828 461 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 UMPSP11172 480 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 ANPEPP15144 967 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 IFNA8P32881 189 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 RAD52P43351 418 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 DAP3P51398 398 aaKnown RBP10.25□□□□□ -0.77
UPF3B-204ENST00000619445 CLRN1P58418 232 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 MTPNP58546 118 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 TEKQ02763 1124 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 RAB39AQ14964 217 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 TBC1D28Q2M2D7 210 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 VMACQ2NL98 169 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 KRTAP24-1Q3LI83 254 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 COQ5Q5HYK3 327 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 RGS7BPQ6MZT1 257 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-204ENST00000619445 ERICH5Q6P6B1 374 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 GLCCI1Q86VQ1 547 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 LSRQ86X29 649 aaPredicted RBP10.25□□□□□ -0.77
UPF3B-204ENST00000619445 ZCCHC24Q8N2G6 241 aaKnown RBP10.25□□□□□ -0.77
UPF3B-204ENST00000619445 SLC30A7Q8NEW0 376 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 GPR32P1Q8NGA4 272 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 C11orf40Q8WZ69 217 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 TPK1Q9H3S4 243 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 RNF121Q9H920 327 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 NKIRAS2Q9NYR9 191 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 TAS2R5Q9NYW4 299 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 ZNF224Q9NZL3 707 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 DUSP13Q9UII6 198 aa10.25□□□□□ -0.77
UPF3B-204ENST00000619445 MT-ND1P03886 318 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 OPN1SWP03999 348 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 PGA4P0DJD7 388 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 PGA3P0DJD8 388 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 SAGP10523 405 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-204ENST00000619445 KLF3P57682 345 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-204ENST00000619445 TAF11Q15544 211 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 NKPD1Q17RQ9 610 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 LRFN4Q6PJG9 635 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 SLC16A14Q7RTX9 510 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 HDXQ7Z353 690 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 SKA3Q8IX90 412 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 OR8J3Q8NGG0 315 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 OR10A6Q8NH74 314 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 VANGL1Q8TAA9 524 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-204ENST00000619445 ZNF519Q8TB69 540 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 FNDC8Q8TC99 324 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 ECSITQ9BQ95 431 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 SYT3Q9BQG1 590 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 WFDC6Q9BQY6 131 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 VIPAS39Q9H9C1 493 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 SMURF2Q9HAU4 748 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 ARGLU1Q9NWB6 273 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-204ENST00000619445 GRIP1Q9Y3R0 1128 aa10.24□□□□□ -0.77
UPF3B-204ENST00000619445 BBIP1A8MTZ0 92 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 BLOC1S5-TXNDC5H3BN57 136 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 OR5F1O95221 314 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 IGFBP1P08833 259 aaPredicted RBP10.23□□□□□ -0.77
UPF3B-204ENST00000619445 QDPRP09417 244 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 ZNF250P15622 560 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 TAS2R41P59536 307 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 MAPRE2Q15555 327 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 HIST3H3Q16695 136 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 TTMPQ5BVD1 217 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 ELFN2Q5R3F8 820 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 WDR88Q6ZMY6 472 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 DEF8Q6ZN54 512 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 IL17RELQ6ZVW7 336 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 RETREG3Q86VR2 466 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 NOXO1Q8NFA2 376 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 OR4K5Q8NGD3 323 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 OR51F2Q8NH61 342 aa10.23□□□□□ -0.77
UPF3B-204ENST00000619445 SYNPRQ8TBG9 265 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms