RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 BCL10O95999 233 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 HPRP00739 348 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 OSMP13725 252 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 PEX2P28328 305 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
UBXN1-218ENST00000616865 P2RY4P51582 365 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 SLC16A1P53985 500 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 CLDN17P56750 224 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 RPS4XP62701 263 aaKnown RBP13.1□□□□□ -0.31
UBXN1-218ENST00000616865 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
UBXN1-218ENST00000616865 RFX4Q33E94 735 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 ANKRD34AQ69YU3 496 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 CREB3L2Q70SY1 520 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 SLC35D2Q76EJ3 337 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 CXXC5Q7LFL8 322 aaKnown RBP13.1□□□□□ -0.31
UBXN1-218ENST00000616865 HDDC2Q7Z4H3 204 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 TUSC5Q8IXB3 177 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 GALNT4Q8N4A0 578 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 CLDN22Q8N7P3 220 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 ZNF610Q8N9Z0 462 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 TSSK6Q9BXA6 273 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 RIBC2Q9H4K1 309 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 EGLN3Q9H6Z9 239 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 PARPBPQ9NWS1 579 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 GRHPRQ9UBQ7 328 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 IL20RAQ9UHF4 553 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 JMJD1CQ15652 2540 aa13.1□□□□□ -0.31
UBXN1-218ENST00000616865 HIVEP2P31629 2446 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 IGKV3D-15A0A087WSY6 115 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.09□□□□□ -0.31
UBXN1-218ENST00000616865 ZNF716A6NP11 495 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 ZNF724A8MTY0 619 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 CASQ2O14958 399 aaPredicted RBP13.09□□□□□ -0.31
UBXN1-218ENST00000616865 SS18L1O75177 396 aaPredicted RBP13.09□□□□□ -0.31
UBXN1-218ENST00000616865 IFNGR1P15260 489 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 PAX1P15863 534 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 NOS3P29474 1203 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 ERVK-25P63136 954 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 SLC36A3Q495N2 470 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 CLEC12AQ5QGZ9 265 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 KDM4DQ6B0I6 523 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 CASP12Q6UXS9 341 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 DPY19L2P2Q6ZN68 376 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 FAM214BQ7L5A3 538 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 AAED1Q7RTV5 226 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 ZNF100Q8IYN0 542 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 ERMAPQ96PL5 475 aaPredicted RBP13.09□□□□□ -0.31
UBXN1-218ENST00000616865 KATNB1Q9BVA0 655 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 BCO1Q9HAY6 547 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 FLVCR1Q9Y5Y0 555 aa13.09□□□□□ -0.31
UBXN1-218ENST00000616865 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
UBXN1-218ENST00000616865 MRPL33O75394 65 aaKnown RBP13.08□□□□□ -0.32
UBXN1-218ENST00000616865 KRT33AO76009 404 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 PPP1R3DO95685 299 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 ALPLP05186 524 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 THBDP07204 575 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 CD14P08571 375 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 TSPAN19P0C672 248 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 HLA-DOBP13765 273 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 AGTR1P30556 359 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 BIDP55957 195 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 RPL27P61353 136 aaKnown RBP13.08□□□□□ -0.32
UBXN1-218ENST00000616865 ESRRGP62508 458 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 MELKQ14680 651 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 BEX5Q5H9J7 111 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 OGFRL1Q5TC84 451 aaPredicted RBP13.08□□□□□ -0.32
UBXN1-218ENST00000616865 GPR139Q6DWJ6 353 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 NIPAL3Q6P499 406 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 THSD4Q6ZMP0 1018 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF704Q6ZNC4 412 aaPredicted RBP13.08□□□□□ -0.32
UBXN1-218ENST00000616865 PARP8Q8N3A8 854 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 PACRGLQ8N7B6 248 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 TMEM171Q8WVE6 324 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 ZNF570Q96NI8 536 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 TXNIPQ9H3M7 391 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 C12orf49Q9H741 205 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 FANCFQ9NPI8 374 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 MED29Q9NX70 200 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 IL20Q9NYY1 176 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 B3GAT1Q9P2W7 334 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 REV1Q9UBZ9 1251 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 BAIAP2Q9UQB8 552 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 IER3IP1Q9Y5U9 82 aa13.08□□□□□ -0.32
UBXN1-218ENST00000616865 TLN2Q9Y4G6 2542 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 A6NIZ1 184 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 XKRYO14609 159 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 TRAF3IP2O43734 574 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 TMCC2O75069 709 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 SLC43A1O75387 559 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 IGFBP1P08833 259 aaPredicted RBP13.07□□□□□ -0.32
UBXN1-218ENST00000616865 PPP3CBP16298 524 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 ACVR1BP36896 505 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 CRISP1P54107 249 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 RAP1BP61224 184 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 RAP1AP62834 184 aa13.07□□□□□ -0.32
UBXN1-218ENST00000616865 FHL1Q13642 323 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms