RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 CHODLQ9H9P2 273 aa16.42■□□□□ 0.22
CDX1-202ENST00000616154 EGFL7Q9UHF1 273 aa16.42■□□□□ 0.22
CDX1-202ENST00000616154 CPSF4LA6NMK7 179 aaKnown RBP16.41■□□□□ 0.22
CDX1-202ENST00000616154 AKAP8O43823 692 aaKnown RBP16.41■□□□□ 0.22
CDX1-202ENST00000616154 IGF2P01344 180 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 IFNA14P01570 189 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 CBR1P16152 277 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 ZNF23P17027 643 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 HGFACQ04756 655 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 PUDPQ08623 228 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 ZNF74Q16587 644 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 GLYATQ6IB77 296 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 PXKQ7Z7A4 578 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 MYPOPQ86VE0 399 aaPredicted RBP16.41■□□□□ 0.22
CDX1-202ENST00000616154 LRR1Q96L50 414 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 PRSS27Q9BQR3 290 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 RAB1BQ9H0U4 201 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 GPR35Q9HC97 309 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 NOX1Q9Y5S8 564 aa16.41■□□□□ 0.22
CDX1-202ENST00000616154 PLPP3O14495 311 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 CELA3BP08861 270 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 NCK1P16333 377 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 ATP6V1B2P21281 511 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 C1DQ13901 141 aaKnown RBP16.4■□□□□ 0.22
CDX1-202ENST00000616154 IQCCQ4KMZ1 466 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 MTX3Q5HYI7 312 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 CARM1Q86X55 608 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 UEVLDQ8IX04 471 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 GPR137CQ8N3F9 429 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 PIK3C3Q8NEB9 887 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 OR5J2Q8NH18 312 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 VANGL1Q8TAA9 524 aaPredicted RBP16.4■□□□□ 0.22
CDX1-202ENST00000616154 BPESC1Q9GZL8 116 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 DCAF13Q9NV06 445 aaKnown RBP16.4■□□□□ 0.22
CDX1-202ENST00000616154 SLC7A7Q9UM01 511 aa16.4■□□□□ 0.22
CDX1-202ENST00000616154 VSTM5A8MXK1 200 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 LRRN3E7EW58 273 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 hCG_2039718K7EN88 272 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 GSTA4O15217 222 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 OR5F1O95221 314 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 STAMBPO95630 424 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 THRBP10828 461 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 HLA-DOBP13765 273 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 NPR2P20594 1047 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 HNF1AP20823 631 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 GIFP27352 417 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 THBS4P35443 961 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 ARR3P36575 388 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 ZP4Q12836 540 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 PMS2P3Q13401 168 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 CEACAM16Q2WEN9 425 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 IL17RELQ6ZVW7 336 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 ZNF627Q7L945 461 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 DHFR2Q86XF0 187 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 C20orf196Q8IYI0 205 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 RNF217Q8TC41 542 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 NEU4Q8WWR8 484 aaPredicted RBP16.39■□□□□ 0.21
CDX1-202ENST00000616154 DOK1Q99704 481 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 CRLF2Q9HC73 371 aa16.39■□□□□ 0.21
CDX1-202ENST00000616154 NBEAL1Q6ZS30 2694 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 IGHV2OR16-5A0A0B4J2B6 119 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 TCRBV5S2A0A599 114 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 ZNF503-AS2A6NEH8 195 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 AQP12BA6NM10 295 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 ANKRD65E5RJM6 399 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 ERCC1P07992 297 aaPredicted RBP16.38■□□□□ 0.21
CDX1-202ENST00000616154 ASAH2BP0C7U1 165 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 CBLP22681 906 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 RBM34P42696 430 aaKnown RBP16.38■□□□□ 0.21
CDX1-202ENST00000616154 POU3F1Q03052 451 aaPredicted RBP16.38■□□□□ 0.21
CDX1-202ENST00000616154 FLOT2Q14254 428 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 CYBRD1Q53TN4 286 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 TTC33Q6PID6 262 aaPredicted RBP16.38■□□□□ 0.21
CDX1-202ENST00000616154 CBLL1Q75N03 491 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 AQP12AQ8IXF9 295 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 CCDC36Q8IYA8 594 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 POP5Q969H6 163 aaKnown RBP16.38■□□□□ 0.21
CDX1-202ENST00000616154 ZNF837Q96EG3 531 aaPredicted RBP16.38■□□□□ 0.21
CDX1-202ENST00000616154 NSMCE2Q96MF7 247 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 MEPEQ9NQ76 525 aaPredicted RBP16.38■□□□□ 0.21
CDX1-202ENST00000616154 ZNF229Q9UJW7 825 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 SH3GLB1Q9Y371 365 aa16.38■□□□□ 0.21
CDX1-202ENST00000616154 TCRBV3S1A0A5B6 114 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 ZNF99A8MXY4 864 aaPredicted RBP16.37■□□□□ 0.21
CDX1-202ENST00000616154 GMNNO75496 209 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 TGFAP01135 160 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 DAOP14920 347 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 ACTR3P61158 418 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 MDP1Q86V88 176 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 SVOPLQ8N434 492 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 IL17RDQ8NFM7 739 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 LIPHQ8WWY8 451 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 SOX7Q9BT81 388 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 C19orf24Q9BVV8 132 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 TAS2R5Q9NYW4 299 aa16.37■□□□□ 0.21
CDX1-202ENST00000616154 TMEM129A0AVI4 362 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 CIB2O75838 187 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 TACSTD2P09758 323 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 TSPAN19P0C672 248 aa16.36■□□□□ 0.21
CDX1-202ENST00000616154 TNFRSF1BP20333 461 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms