RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 PAQR4Q8N4S7 273 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 DPP10Q8N608 796 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC30A7Q8NEW0 376 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC25A44Q96H78 314 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 CGREF1Q99674 301 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 RABEP2Q9H5N1 569 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZNF229Q9UJW7 825 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 NDUFAF1Q9Y375 327 aa17.8■□□□□ 0.44
TRAPPC3-208ENST00000616074 TRAPPC13A5PLN9 417 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 DHHO43323 396 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 ASAH2BP0C7U1 165 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 FAM157BP0CG42 384 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 CCL2P13500 99 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 RGS7BPQ6MZT1 257 aaPredicted RBP17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 TAMM41Q96BW9 452 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZNF426Q9BUY5 554 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZNF385DQ9H6B1 395 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 LPAR2Q9HBW0 351 aa17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZNF346Q9UL40 294 aaKnown RBP17.79■□□□□ 0.44
TRAPPC3-208ENST00000616074 ANGPT2O15123 496 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 RP2O75695 350 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 FARS2O95363 451 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 CLPTM1O96005 669 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 QDPRP09417 244 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 UMPSP11172 480 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 MAGEB1P43366 347 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 TMEM33P57088 247 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 MRPS11P82912 194 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 NKPD1Q17RQ9 610 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 TTMPQ5BVD1 217 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 PATL1Q86TB9 770 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 OR4K5Q8NGD3 323 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 DYDC1Q8WWB3 177 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 TMEM186Q96B77 213 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 THOC1Q96FV9 657 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 MPP4Q96JB8 637 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 ATP6V1G3Q96LB4 118 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 TSPAN32Q96QS1 320 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC19A3Q9BZV2 496 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 PCDHAC1Q9H158 963 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 OR51B6Q9H340 312 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 KAT8Q9H7Z6 458 aaKnown RBP17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 RNF121Q9H920 327 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 HIF1ANQ9NWT6 349 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 TREM2Q9NZC2 230 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 TAAR3PQ9P1P4 343 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 METRNQ9UJH8 293 aa17.78■□□□□ 0.44
TRAPPC3-208ENST00000616074 PPIHO43447 177 aaKnown RBP17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 ENTPD5O75356 428 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 BCL10O95999 233 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 TFP02787 698 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 MSMBP08118 114 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 GAAP10253 952 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 PCGF2P35227 344 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 CRYBA2P53672 197 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 ERVS71-1P61550 626 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 RUNX1T1Q06455 604 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 TMEM53Q6P2H8 277 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 NANOGNBQ7Z5D8 188 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC30A8Q8IWU4 369 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 ZNF347Q96SE7 839 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 PRSS27Q9BQR3 290 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 METTL17Q9H7H0 456 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 CDH20Q9HBT6 801 aa17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 MEPEQ9NQ76 525 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-208ENST00000616074 SLC22A23A1A5C7 686 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 IGHG1P01857 330 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 HIST1H2ABP04908 130 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 CLRN1P58418 232 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 MYBPC1Q00872 1141 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 NFYCQ13952 458 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 HIST3H3Q16695 136 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 SLC36A2Q495M3 483 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 DEF8Q6ZN54 512 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 HIST3H2AQ7L7L0 130 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 SLC16A14Q7RTX9 510 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 MEX3DQ86XN8 651 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 OR10A6Q8NH74 314 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 SLC26A7Q8TE54 656 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 STON2Q8WXE9 905 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 HIST1H2ACQ93077 130 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 MCHR2Q969V1 340 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 ZNF416Q9BWM5 594 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 OCEL1Q9H607 264 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 TRIM33Q9UPN9 1127 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 TENM1Q9UKZ4 2725 aa17.76■□□□□ 0.43
TRAPPC3-208ENST00000616074 IGLV3-9A0A075B6K5 115 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 C17orf100A8MU93 164 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 BLOC1S5-TXNDC5H3BN57 136 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 VENTXO95231 258 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 SNAP29O95721 258 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 F13BP05160 661 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 LCKP06239 509 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 ZNF250P15622 560 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 KLF3P57682 345 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 LMO4P61968 165 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 TBC1D28Q2M2D7 210 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 DPPA2Q7Z7J5 298 aa17.75■□□□□ 0.43
TRAPPC3-208ENST00000616074 NOXO1Q8NFA2 376 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms