RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 TCEAL2Q9H3H9 227 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 APMAPQ9HDC9 416 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR52A1Q9UKL2 312 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 H2AFB2P0C5Z0 115 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 CD34P28906 385 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 EGR3Q06889 387 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 FAPQ12884 760 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 SYT14P1Q58G82 188 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 EXOSC6Q5RKV6 272 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 Q8IYB0 196 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 FAM181AQ8N9Y4 354 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TSSK2Q96PF2 358 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 NICN1Q9BSH3 213 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF700Q9H0M5 742 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 GNG12Q9UBI6 72 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC5A6Q9Y289 635 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 SPAARA0A1B0GVQ0 90 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 A0A1W2PQD3 144 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 FAM171A2A8MVW0 826 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 DEGS1O15121 323 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 PRICKLE3O43900 615 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 KIAA0513O60268 411 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 LCMT2O60294 686 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 QDPRP09417 244 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 CEACAM1P13688 526 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 LRRC10Q5BKY1 277 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMEM215Q68D42 235 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 GDPD1Q8N9F7 314 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 CYB561A3Q8NBI2 242 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 CASTOR1Q8WTX7 329 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 MYEOVQ96EZ4 313 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 SERGEFQ9UGK8 458 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 A0A1B0GUH1 482 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 EME2A4GXA9 379 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 ALDOCP09972 364 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TNFRSF1BP20333 461 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 LSSP48449 732 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 THBS3P49746 956 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 PPP1R8Q12972 351 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TPBGQ13641 420 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 RSPO4Q2I0M5 234 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 ACSM3Q53FZ2 586 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TRAT1Q6PIZ9 186 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMEM200AQ86VY9 491 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 RDH10Q8IZV5 341 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 APOBEC3DQ96AK3 386 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 CTSFQ9UBX1 484 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 IGHV5-51A0A0C4DH38 117 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 M0R082 166 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TERTO14746 1132 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 AGFG2O95081 481 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 RAB13P51153 203 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 TAS2R19P59542 299 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 ALKBH1Q13686 389 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 Q499Y3 187 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 C6orf89Q6UWU4 347 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 DNASE2BQ8WZ79 361 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 PIGLQ9Y2B2 252 aa8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 MRPS28Q9Y2Q9 187 aaKnown RBP8.89□□□□□ -0.99
TNFRSF9-204ENST00000615230 HMGN4O00479 90 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 PRKRAO75569 313 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF17P17021 662 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 GCAP28676 217 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 NKG7Q16617 165 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 CMPK2Q5EBM0 449 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 FAM209AQ5JX71 171 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 BTNL3Q6UXE8 466 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 Q6ZSR9 355 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 PTRH1Q86Y79 214 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ADGRG5Q8IZF4 528 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLC16A11Q8NCK7 471 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMIGD2Q96BF3 282 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SNX18Q96RF0 628 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 SLCO5A1Q9H2Y9 848 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 TMEM100Q9NV29 134 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 FOCADQ5VW36 1801 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 TRAV18A0A075B6X5 111 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 KIR2DS1A0A191URI9 304 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF732B4DXR9 585 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 PAPLNO95428 1278 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 AMY2AP04746 511 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 LIPAP38571 399 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 DDOSTP39656 456 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 KIR2DS4P43632 304 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 FABP6P51161 128 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 KIR2DS1Q14954 304 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 AKIRIN2Q53H80 203 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF691Q5VV52 312 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 PIWIL3Q7Z3Z3 882 aaKnown RBP8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 OR6V1Q8N148 313 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 PELI3Q8N2H9 469 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 NPRL2Q8WTW4 380 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ZNF681Q96N22 645 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 HINT2Q9BX68 163 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 ANKRD60Q9BZ19 345 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 MOSPD3O75425 235 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 GNB2P62879 340 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 GALEQ14376 348 aa8.88□□□□□ -0.99
TNFRSF9-204ENST00000615230 GRK1Q15835 563 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms