RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 HLA-HP01893 362 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 QDPRP09417 244 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 CECR9P0C854 216 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 PAX1P15863 534 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 CBR1P16152 277 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ACADSP16219 412 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 PTH2RP49190 550 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 FXYD6P3P58550 94 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 CTXN1P60606 82 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 NKX6-1P78426 367 aaPredicted RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 TRIM25Q14258 630 aaKnown RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 LCN8Q6JVE9 175 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 SLC22A25Q6T423 547 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ZNF813Q6ZN06 617 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 OAFQ86UD1 273 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 DTX2Q86UW9 622 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 LRRC75A-AS1Q8N1F1 130 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ARHGAP24Q8N264 748 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 CLDN22Q8N7P3 220 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 FAM169BQ8N8A8 192 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 SYT14Q8NB59 555 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 NOXO1Q8NFA2 376 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 OR4K5Q8NGD3 323 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 MCHR2Q969V1 340 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 TSPAN32Q96QS1 320 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 TRAF4Q9BUZ4 470 aaPredicted RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 C1orf21Q9H246 121 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 IL1RAPQ9NPH3 570 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 ZNF701Q9NV72 531 aaPredicted RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 MOKQ9UQ07 419 aa11.09□□□□□ -0.63
CD9-212ENST00000610354 RRP15Q9Y3B9 282 aaKnown RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 FAM32AQ9Y421 112 aaKnown RBP11.09□□□□□ -0.63
CD9-212ENST00000610354 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 ACOT8O14734 319 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 SLC2A10O95528 541 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 IGHG1P01857 330 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 FABP3P05413 133 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 PATE4P0C8F1 98 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 SAGP10523 405 aaPredicted RBP11.08□□□□□ -0.64
CD9-212ENST00000610354 SLC9A3P48764 834 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 RPL27P61353 136 aaKnown RBP11.08□□□□□ -0.64
CD9-212ENST00000610354 NAAAQ02083 359 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 FMODQ06828 376 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 TOP3AQ13472 1001 aaPredicted RBP11.08□□□□□ -0.64
CD9-212ENST00000610354 C3orf36Q3SXR2 165 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 ZBED5Q49AG3 693 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 C11orf71Q6IPW1 123 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 SLC25A47Q6Q0C1 308 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 THSD4Q6ZMP0 1018 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 PIWIL3Q7Z3Z3 882 aaKnown RBP11.08□□□□□ -0.64
CD9-212ENST00000610354 ZER1Q7Z7L7 766 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 ZDHHC21Q8IVQ6 265 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 SKA3Q8IX90 412 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 TMEM171Q8WVE6 324 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 PERPQ96FX8 193 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 RADILQ96JH8 1075 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 DHRS9Q9BPW9 319 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 GSX2Q9BZM3 304 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 TMEM38BQ9NVV0 291 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 PRPF19Q9UMS4 504 aaKnown RBP11.08□□□□□ -0.64
CD9-212ENST00000610354 SIGLEC7Q9Y286 467 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 UGT2A1Q9Y4X1 527 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 ATP23Q9Y6H3 246 aa11.08□□□□□ -0.64
CD9-212ENST00000610354 CENPBD1B2RD01 187 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 NDUFS7O75251 213 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 GADD45GO95257 159 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 ITGA2P17301 1181 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 RRM2P31350 389 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 TTKP33981 857 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 ACVR1BP36896 505 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 CDKN1AP38936 164 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 MAGEA2P43356 314 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 DAP3P51398 398 aaKnown RBP11.07□□□□□ -0.64
CD9-212ENST00000610354 IDH3GP51553 393 aaPredicted RBP11.07□□□□□ -0.64
CD9-212ENST00000610354 CLRN1P58418 232 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 ERVK-25P63136 954 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 SPIBQ01892 262 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 HGFACQ04756 655 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 PIGFQ07326 219 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 ANKDD1AQ495B1 522 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 C10orf128Q5T292 105 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 PGM2L1Q6PCE3 622 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 DHFR2Q86XF0 187 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 CDK20Q8IZL9 346 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 SLC22A24Q8N4F4 322 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 GTPBP3Q969Y2 492 aaKnown RBP11.07□□□□□ -0.64
CD9-212ENST00000610354 SH3GL3Q99963 347 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 THTPAQ9BU02 230 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 DLL4Q9NR61 685 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 VNN3Q9NY84 501 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 ADAM18Q9Y3Q7 739 aa11.07□□□□□ -0.64
CD9-212ENST00000610354 IGHV2OR16-5A0A0B4J2B6 119 aa11.06□□□□□ -0.64
CD9-212ENST00000610354 IMPA2O14732 288 aa11.06□□□□□ -0.64
CD9-212ENST00000610354 CD79AP11912 226 aa11.06□□□□□ -0.64
CD9-212ENST00000610354 ZNF14P17017 642 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms