RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 TMEM54Q969K7 222 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 ZNF837Q96EG3 531 aaPredicted RBP6.78□□□□□ -1.32
MSH6-211ENST00000606499 RDH12Q96NR8 316 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 TSSK2Q96PF2 358 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 PITX2Q99697 317 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 HCAR1Q9BXC0 346 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 ULBP2Q9BZM5 246 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 SYT4Q9H2B2 425 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 VCX3BQ9H321 246 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 MED20Q9H944 212 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 C8orf4Q9NR00 106 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 CMC2Q9NRP2 79 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 PLSCR4Q9NRQ2 329 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 FAM118AQ9NWS6 357 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 MALT1Q9UDY8 824 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 BAIAP2Q9UQB8 552 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 GPR52Q9Y2T5 361 aa6.78□□□□□ -1.32
MSH6-211ENST00000606499 INTS1Q8N201 2190 aaKnown RBP6.78□□□□□ -1.32
MSH6-211ENST00000606499 CELSR2Q9HCU4 2923 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 OR6C68A6NDL8 312 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 RIIAD1A6NNX1 92 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 A8MXE2 369 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 DCTN6O00399 190 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 MSTNO14793 375 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 PRKYO43930 277 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 SEC14L2O76054 403 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 CLIC3O95833 236 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 IFNGP01579 166 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 GYPBP06028 91 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 QDPRP09417 244 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 GNAO1P09471 354 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 CLUP10909 449 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 ZNF3P17036 446 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 GGT2P36268 569 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 ADARB1P78563 741 aaKnown RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 ROR2Q01974 943 aaKnown RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 SRSF1Q07955 248 aaKnown RBP eCLIP6.77□□□□□ -1.33
MSH6-211ENST00000606499 TSC22D1Q15714 1073 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 CEACAM16Q2WEN9 425 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 C6orf52Q5T4I8 152 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 FBXW9Q5XUX1 488 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 LRFN4Q6PJG9 635 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 ZNF474Q6S9Z5 364 aaPredicted RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 Q6ZT83 130 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 MRGPRGQ86SM5 289 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 GABRG1Q8N1C3 465 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 TCEANCQ8N8B7 351 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 POMGNT2Q8NAT1 580 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 NPEPL1Q8NDH3 523 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 BBS1Q8NFJ9 593 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 CA5BP1Q8WTZ4 195 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 ITLN2Q8WWU7 325 aaPredicted RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 ASB5Q8WWX0 329 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 UBE2FQ969M7 185 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 OTULINQ96BN8 352 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 NMD3Q96D46 503 aaKnown RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 PLEKHA8Q96JA3 519 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 HRASLS5Q96KN8 279 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 LRR1Q96L50 414 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 FOXN4Q96NZ1 517 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 SLC38A2Q96QD8 506 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 IL4I1Q96RQ9 567 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 ALG12Q9BV10 488 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 ADI1Q9BV57 179 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 LINC00470Q9BZP3 86 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 NUAK2Q9H093 628 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 PIGMQ9H3S5 423 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 RERGLQ9H628 205 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 CRLF2Q9HC73 371 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 GPR35Q9HC97 309 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 HINT3Q9NQE9 182 aaKnown RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 RPRD1BQ9NQG5 326 aaKnown RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 ASB6Q9NWX5 421 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 GALNT8Q9NY28 637 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 TVP23BQ9NYZ1 205 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 GLTPQ9NZD2 209 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 VSX1Q9NZR4 365 aaPredicted RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 JKAMPQ9P055 326 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 UPB1Q9UBR1 384 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 KLHL21Q9UJP4 597 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 NDRG4Q9ULP0 352 aaKnown RBP6.77□□□□□ -1.33
MSH6-211ENST00000606499 GMPPBQ9Y5P6 360 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 DOPEY1Q5JWR5 2465 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 ESPL1Q14674 2120 aa6.77□□□□□ -1.33
MSH6-211ENST00000606499 FREM1Q5H8C1 2179 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 IGLV1-36A0A0B4J1U3 117 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 LOC100130705A0A1B0GUX0 176 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 OR6C65A6NJZ3 312 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 FAM171A2A8MVW0 826 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 CENPBD1B2RD01 187 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ZNF587BE7ETH6 402 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 PRR23D1E9PI22 279 aaPredicted RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 H0YJX3 145 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 SLC16A6O15403 523 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 SLC16A7O60669 478 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 LYZL6O75951 148 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 AGFG2O95081 481 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 GPANK1O95872 356 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 RENP00797 406 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 HMGN1P05114 100 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms