RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SLC2A5P22732 501 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 ATP6V1E1P36543 226 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 EIF2S3LQ2VIR3 472 aaKnown RBP16.49■□□□□ 0.23
SSBP4-212ENST00000601919 ZBTB46Q86UZ6 589 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 TUSC5Q8IXB3 177 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 TMEM123Q8N131 208 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 OR6K6Q8NGW6 343 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 RNFT2Q96EX2 444 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 ZFP3Q96NJ6 502 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 HCAR1Q9BXC0 346 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 NUAK2Q9H093 628 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 RACGAP1Q9H0H5 632 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 AMBNQ9NP70 447 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 HAO2Q9NYQ3 351 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 GLTPQ9NZD2 209 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 PSORS1C1Q9UIG5 152 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 ING1Q9UK53 422 aaPredicted RBP16.49■□□□□ 0.23
SSBP4-212ENST00000601919 B9D1Q9UPM9 204 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 PCDHGB1Q9Y5G3 927 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 ARHGAP21Q5T5U3 1957 aa16.49■□□□□ 0.23
SSBP4-212ENST00000601919 ALPK2Q86TB3 2170 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 ZNHIT1O43257 154 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 MRPS14O60783 128 aaKnown RBP16.48■□□□□ 0.23
SSBP4-212ENST00000601919 SS18L1O75177 396 aaPredicted RBP16.48■□□□□ 0.23
SSBP4-212ENST00000601919 GYPBP06028 91 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 SELENOPP49908 381 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 GLO1Q04760 184 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 RAB40BQ12829 278 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 NFATC3Q12968 1075 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 HIST3H3Q16695 136 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 RPTNQ6XPR3 784 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 C20orf196Q8IYI0 205 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 OR6V1Q8N148 313 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 GPR137CQ8N3F9 429 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 STX19Q8N4C7 294 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 GGHQ92820 318 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 TMEM54Q969K7 222 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 ZNF775Q96BV0 537 aaPredicted RBP16.48■□□□□ 0.23
SSBP4-212ENST00000601919 COPS4Q9BT78 406 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 DUSP21Q9H596 190 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 RERGLQ9H628 205 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 MRPS18AQ9NVS2 196 aaKnown RBP16.48■□□□□ 0.23
SSBP4-212ENST00000601919 ZNF835Q9Y2P0 537 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 EMC9Q9Y3B6 208 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 MED12LQ86YW9 2145 aa16.48■□□□□ 0.23
SSBP4-212ENST00000601919 MBD3L4A6NDZ8 208 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-212ENST00000601919 MBD3L3A6NE82 208 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-212ENST00000601919 CCDC182A6NF36 153 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 MBD3L5A6NJ08 208 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-212ENST00000601919 ATXN7O15265 892 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-212ENST00000601919 SLC19A2O60779 497 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 KRT33AO76009 404 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 FADS2O95864 444 aaKnown RBP16.47■□□□□ 0.23
SSBP4-212ENST00000601919 CLUP10909 449 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 AGTR1P30556 359 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 SLC15A1P46059 708 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 CASP6P55212 293 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 SLC35A2P78381 396 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 PLXDC2Q6UX71 529 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 B3GNT6Q6ZMB0 384 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 AHSA2Q719I0 299 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 ZNF100Q8IYN0 542 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 POMGNT2Q8NAT1 580 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 ST6GALNAC3Q8NDV1 305 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 MBD3L2Q8NHZ7 208 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-212ENST00000601919 APH1AQ96BI3 265 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 LINC00470Q9BZP3 86 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 FKBP14Q9NWM8 211 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 CLEC4AQ9UMR7 237 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 ATMQ13315 3056 aa16.47■□□□□ 0.23
SSBP4-212ENST00000601919 ZGRF1Q86YA3 2104 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 DOCK7Q96N67 2140 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 A0A087WXM4 84 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 TRIM64A6NGJ6 449 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 RGS10O43665 173 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 CRHP06850 196 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 QDPRP09417 244 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 CTLA4P16410 223 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 GSTT1P30711 240 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 PYCR1P32322 319 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 TIMP3P35625 211 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 GUCA1AP43080 201 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-212ENST00000601919 PER3P56645 1201 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 GGTLC2Q14390 218 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 RIPPLY2Q5TAB7 128 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 TSPAN14Q8NG11 270 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 OR51L1Q8NGJ5 315 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 MCHR2Q969V1 340 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 NMD3Q96D46 503 aaKnown RBP16.46■□□□□ 0.23
SSBP4-212ENST00000601919 TSSK2Q96PF2 358 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 CNN2Q99439 309 aaKnown RBP16.46■□□□□ 0.23
SSBP4-212ENST00000601919 ULBP2Q9BZM5 246 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 SLCO5A1Q9H2Y9 848 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 FOXD3Q9UJU5 478 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-212ENST00000601919 SNX5Q9Y5X3 404 aa16.46■□□□□ 0.23
SSBP4-212ENST00000601919 SPTA1P02549 2419 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 IGLV1-36A0A0B4J1U3 117 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 DCTN6O00399 190 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 RAB36O95755 333 aa16.45■□□□□ 0.22
SSBP4-212ENST00000601919 IL2RAP01589 272 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms