RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 CD47Q08722 323 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 CRMP1Q14194 572 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 TSPO2Q5TGU0 170 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 FBXW9Q5XUX1 488 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 LRFN4Q6PJG9 635 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.68□□□□□ -0.38
UPF1-211ENST00000600868 GPR137CQ8N3F9 429 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 TCEANCQ8N8B7 351 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 CYB561A3Q8NBI2 242 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 SETD9Q8NE22 299 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 OR6N1Q8NGY5 312 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 TMEM163Q8TC26 289 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 CCDC120Q96HB5 630 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 NMNAT2Q9BZQ4 307 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 SYT4Q9H2B2 425 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 PIGMQ9H3S5 423 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 B3GAT2Q9NPZ5 323 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 SLC7A10Q9NS82 523 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 MALT1Q9UDY8 824 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 HSPE1-MOB4S4R3N1 261 aa12.68□□□□□ -0.38
UPF1-211ENST00000600868 INTS1Q8N201 2190 aaKnown RBP12.67□□□□□ -0.38
UPF1-211ENST00000600868 PRR23D1E9PI22 279 aaPredicted RBP12.67□□□□□ -0.38
UPF1-211ENST00000600868 RPL36A-HNRNPH2H7BZ11 118 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 DVL2O14641 736 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 TLX2O43763 284 aaPredicted RBP12.67□□□□□ -0.38
UPF1-211ENST00000600868 MPZL2O60487 215 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 CLIC3O95833 236 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 QDPRP09417 244 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 GNAO1P09471 354 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 PRR23D2P0DMB1 279 aaPredicted RBP12.67□□□□□ -0.38
UPF1-211ENST00000600868 GABRB1P18505 474 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 PHYHD1Q5SRE7 291 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 SLC25A30Q5SVS4 291 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 C10orf128Q5T292 105 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 SLC25A47Q6Q0C1 308 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 CPOQ8IVL8 374 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ENTHD1Q8IYW4 607 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 FAM26EQ8N5C1 309 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 RHOXF1Q8NHV9 184 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ASB5Q8WWX0 329 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 PTP4A1Q93096 173 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 UBE2FQ969M7 185 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 MCHR2Q969V1 340 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 MUS81Q96NY9 551 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 IL4I1Q96RQ9 567 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ANKRD60Q9BZ19 345 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ULBP2Q9BZM5 246 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 HINT3Q9NQE9 182 aaKnown RBP12.67□□□□□ -0.38
UPF1-211ENST00000600868 ASB6Q9NWX5 421 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ZNF226Q9NYT6 803 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 UPB1Q9UBR1 384 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 PRSS50Q9UI38 385 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ERRFI1Q9UJM3 462 aaPredicted RBP12.67□□□□□ -0.38
UPF1-211ENST00000600868 RNF6Q9Y252 685 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 GPR52Q9Y2T5 361 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 FKBP7Q9Y680 259 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 MYO7BQ6PIF6 2116 aa12.67□□□□□ -0.38
UPF1-211ENST00000600868 ZNF462Q96JM2 2506 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 ZNF587BE7ETH6 402 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 M0R129 80 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 M0R3G1 203 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 MSTNO14793 375 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 KRT33AO76009 404 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 CTLA4P16410 223 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 BMP5P22003 454 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 CRABP1P29762 137 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 CHRNB4P30926 498 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 ISL1P61371 349 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 FMODQ06828 376 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 LGALS3BPQ08380 585 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 STK11Q15831 433 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 PLBD1Q6P4A8 553 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 DNM1P34Q6PK57 102 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 Q6ZT83 130 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 LINGO2Q7L985 606 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 CXXC5Q7LFL8 322 aaKnown RBP12.66□□□□□ -0.38
UPF1-211ENST00000600868 ABHD12BQ7Z5M8 362 aaPredicted RBP12.66□□□□□ -0.38
UPF1-211ENST00000600868 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 ZBTB46Q86UZ6 589 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 LIX1LQ8IVB5 337 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 C8orf59Q8N0T1 100 aaPredicted RBP12.66□□□□□ -0.38
UPF1-211ENST00000600868 UBE2J2Q8N2K1 259 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 ZNF610Q8N9Z0 462 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 OR2T4Q8NH00 348 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 ALKBH3Q96Q83 286 aaPredicted RBP12.66□□□□□ -0.38
UPF1-211ENST00000600868 NUAK2Q9H093 628 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 RACGAP1Q9H0H5 632 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 GPR35Q9HC97 309 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 RPRD1BQ9NQG5 326 aaKnown RBP12.66□□□□□ -0.38
UPF1-211ENST00000600868 COQ3Q9NZJ6 369 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 JKAMPQ9P055 326 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 B9D1Q9UPM9 204 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 SLC5A6Q9Y289 635 aa12.66□□□□□ -0.38
UPF1-211ENST00000600868 NCOA6Q14686 2063 aaPredicted RBP12.65□□□□□ -0.38
UPF1-211ENST00000600868 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
UPF1-211ENST00000600868 IGKV1D-43A0A0B4J1Z2 117 aa12.65□□□□□ -0.38
UPF1-211ENST00000600868 FAM183AA6NL82 134 aa12.65□□□□□ -0.38
UPF1-211ENST00000600868 DCTN6O00399 190 aa12.65□□□□□ -0.38
UPF1-211ENST00000600868 DHHO43323 396 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms