RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 MUC13Q9H3R2 512 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 B3GAT2Q9NPZ5 323 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 ZNF701Q9NV72 531 aaPredicted RBP13.7□□□□□ -0.22
RPS28-203ENST00000600659 CISD1Q9NZ45 108 aaKnown RBP13.7□□□□□ -0.22
RPS28-203ENST00000600659 LAMP3Q9UQV4 416 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 SIGLEC7Q9Y286 467 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 UGT2A1Q9Y4X1 527 aa13.7□□□□□ -0.22
RPS28-203ENST00000600659 ATP6V1G2-DDX39BF2Z307 99 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 DHHO43323 396 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 HLA-HP01893 362 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 QDPRP09417 244 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 CBR1P16152 277 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 CTXN1P60606 82 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 MYBPC1Q00872 1141 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 SPIBQ01892 262 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 FMODQ06828 376 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 ANKDD1AQ495B1 522 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 MTX3Q5HYI7 312 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 C10orf128Q5T292 105 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 C11orf71Q6IPW1 123 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 PGM2L1Q6PCE3 622 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 THSD4Q6ZMP0 1018 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 FAM122BQ7Z309 247 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 ZER1Q7Z7L7 766 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 OAFQ86UD1 273 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 ZDHHC21Q8IVQ6 265 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 SYT14Q8NB59 555 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 WFDC11Q8NEX6 87 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 SMAP2Q8WU79 429 aaPredicted RBP13.69□□□□□ -0.22
RPS28-203ENST00000600659 MCHR2Q969V1 340 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 ASB9Q96DX5 294 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 TRAF4Q9BUZ4 470 aaPredicted RBP13.69□□□□□ -0.22
RPS28-203ENST00000600659 TMEM38BQ9NVV0 291 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 ZNF346Q9UL40 294 aaKnown RBP13.69□□□□□ -0.22
RPS28-203ENST00000600659 MOKQ9UQ07 419 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 TMEM5Q9Y2B1 443 aa13.69□□□□□ -0.22
RPS28-203ENST00000600659 FAM32AQ9Y421 112 aaKnown RBP13.69□□□□□ -0.22
RPS28-203ENST00000600659 CHD3Q12873 2000 aaKnown RBP13.69□□□□□ -0.22
RPS28-203ENST00000600659 GADD45GO95257 159 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 SLC2A10O95528 541 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 ITGA2P17301 1181 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 RRM2P31350 389 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 PTH2RP49190 550 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 RPL27P61353 136 aaKnown RBP13.68□□□□□ -0.22
RPS28-203ENST00000600659 NAAAQ02083 359 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 TOP3AQ13472 1001 aaPredicted RBP13.68□□□□□ -0.22
RPS28-203ENST00000600659 TAF11Q15544 211 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 ZBED5Q49AG3 693 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 SLC22A25Q6T423 547 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 DHFR2Q86XF0 187 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 OR4C15Q8NGM1 316 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 CCDC124Q96CT7 223 aaKnown RBP13.68□□□□□ -0.22
RPS28-203ENST00000600659 GPX7Q96SL4 187 aaPredicted RBP13.68□□□□□ -0.22
RPS28-203ENST00000600659 KATNB1Q9BVA0 655 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 VNN3Q9NY84 501 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 POFUT2Q9Y2G5 429 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 ADAM18Q9Y3Q7 739 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 LYVE1Q9Y5Y7 322 aa13.68□□□□□ -0.22
RPS28-203ENST00000600659 TMCC2O75069 709 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 ZNF14P17017 642 aaPredicted RBP13.67□□□□□ -0.22
RPS28-203ENST00000600659 PAX7P23759 505 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 HMGA2P52926 109 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 CLRN1P58418 232 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 BNIP1Q12981 228 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 SLC25A47Q6Q0C1 308 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 TGIF2LYQ8IUE0 185 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 ZNF584Q8IVC4 421 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 SKA3Q8IX90 412 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 CCDC36Q8IYA8 594 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 NABP1Q96AH0 204 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 PERPQ96FX8 193 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 RSRC1Q96IZ7 334 aaKnown RBP13.67□□□□□ -0.22
RPS28-203ENST00000600659 DHRS9Q9BPW9 319 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 THTPAQ9BU02 230 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 TMUB1Q9BVT8 246 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 GRIP2Q9C0E4 1043 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 MAGIXQ9H6Y5 334 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 DLL4Q9NR61 685 aa13.67□□□□□ -0.22
RPS28-203ENST00000600659 SMPD2O60906 423 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 CD14P08571 375 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 PATE4P0C8F1 98 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 TTKP33981 857 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 ACVR1BP36896 505 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 IDH3GP51553 393 aaPredicted RBP13.66□□□□□ -0.22
RPS28-203ENST00000600659 ERVK-25P63136 954 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 NKX6-1P78426 367 aaPredicted RBP13.66□□□□□ -0.22
RPS28-203ENST00000600659 HGFACQ04756 655 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 NRN1LQ496H8 165 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 MESTQ5EB52 335 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 ZNF770Q6IQ21 691 aaPredicted RBP13.66□□□□□ -0.22
RPS28-203ENST00000600659 HDDC2Q7Z4H3 204 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 SLC22A24Q8N4F4 322 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 ARIH2OSQ8N7S6 290 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 TMEM171Q8WVE6 324 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 MCUR1Q96AQ8 359 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 MS4A3Q96HJ5 214 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 Q96M85 177 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 ALG12Q9BV10 488 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 SMURF2Q9HAU4 748 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms