RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 ZNF346Q9UL40 294 aaKnown RBP8.44□□□□□ -1.06
VRK3-216ENST00000599342 FZR1Q9UM11 496 aa8.44□□□□□ -1.06
VRK3-216ENST00000599342 SH3GLB1Q9Y371 365 aa8.44□□□□□ -1.06
VRK3-216ENST00000599342 SONP18583 2426 aaKnown RBP8.44□□□□□ -1.06
VRK3-216ENST00000599342 CUBNO60494 3623 aa8.44□□□□□ -1.06
VRK3-216ENST00000599342 SLC22A23A1A5C7 686 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 BBIP1A8MTZ0 92 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 LILRA1O75019 489 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 LYPD3O95274 346 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 PTHP01270 115 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 MT-ND1P03886 318 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 QDPRP09417 244 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 PATE4P0C8F1 98 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 TCN1P20061 433 aaPredicted RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 RBM34P42696 430 aaKnown RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 ALDH3B1P43353 468 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 DAP3P51398 398 aaKnown RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 ZNF84P51523 738 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 SELENOVP59797 346 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 RIN1Q13671 783 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 CCNIQ14094 377 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 MAPRE2Q15555 327 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 FXNQ16595 210 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 NKPD1Q17RQ9 610 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 TBC1D28Q2M2D7 210 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 CR1LQ2VPA4 569 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 SLC36A2Q495M3 483 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 RGS7BPQ6MZT1 257 aaPredicted RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 NANOGP8Q6NSW7 305 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 ERICH5Q6P6B1 374 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 SLC16A14Q7RTX9 510 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 TSPYL5Q86VY4 417 aaPredicted RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 ZNF584Q8IVC4 421 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 SLC30A7Q8NEW0 376 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 NOXO1Q8NFA2 376 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 OR4K5Q8NGD3 323 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 OR8J3Q8NGG0 315 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 LRRC58Q96CX6 371 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 SH3GL3Q99963 347 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 SOX7Q9BT81 388 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 POLR2J2Q9GZM3 115 aaKnown RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 POLR2J3Q9H1A7 115 aaKnown RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 KCNN2Q9H2S1 579 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 NANOGQ9H9S0 305 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 CDH20Q9HBT6 801 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 STX18Q9P2W9 335 aaKnown RBP8.43□□□□□ -1.06
VRK3-216ENST00000599342 DUSP13Q9UII6 198 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 GPR160Q9UJ42 338 aa8.43□□□□□ -1.06
VRK3-216ENST00000599342 YLPM1P49750 1951 aaKnown RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 FBN1P35555 2871 aaKnown RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 IQCMA0A1B0GVH7 501 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 CENPBD1B2RD01 187 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 LYNX1G3V0Z9 82 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 FBP2O00757 339 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 MRASO14807 208 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 OR7A10O76100 309 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 OR5F1O95221 314 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 NPPAP01160 153 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 F13BP05160 661 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 IGFBP1P08833 259 aaPredicted RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 LYNX1P0DP58 116 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 NR2C1P13056 603 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 FUT1P19526 365 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 PCMT1P22061 227 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 ACHEP22303 614 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 IL2RGP31785 369 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 IFNA8P32881 189 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 SRP14P37108 136 aaKnown RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 GPR6P46095 362 aaPredicted RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 GZMMP51124 257 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 SEC24CP53992 1094 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 MYBPC1Q00872 1141 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 PLP2Q04941 152 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 RPL18Q07020 188 aaKnown RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 MAD2L1BPQ15013 274 aaPredicted RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 TRIP10Q15642 601 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 MSMPQ1L6U9 139 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 KRTAP24-1Q3LI83 254 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 NRN1LQ496H8 165 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 LRRC23Q53EV4 343 aaPredicted RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 RABL3Q5HYI8 236 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 COQ5Q5HYK3 327 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 LRFN4Q6PJG9 635 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 LRP11Q86VZ4 500 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 PCYOX1LQ8NBM8 494 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 RBM15BQ8NDT2 890 aaKnown RBP8.42□□□□□ -1.06
VRK3-216ENST00000599342 OR1J2Q8NGS2 313 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 PFN4Q8NHR9 129 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 FGFBP3Q8TAT2 258 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 TMEM255BQ8WV15 326 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 SNX33Q8WV41 574 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 TMEM239Q8WW34 195 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 ASB10Q8WXI3 467 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 RDH5Q92781 318 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 MCHR2Q969V1 340 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 SGTBQ96EQ0 304 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 ZNF347Q96SE7 839 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 PRSS27Q9BQR3 290 aa8.42□□□□□ -1.06
VRK3-216ENST00000599342 LRMDAQ9H2I8 198 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms