RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CMAHPQ9Y471 501 aa13.02□□□□□ -0.33
LIG1-215ENST00000597901 SPEF1Q9Y4P9 236 aa13.02□□□□□ -0.33
LIG1-215ENST00000597901 SNX13Q9Y5W8 968 aa13.02□□□□□ -0.33
LIG1-215ENST00000597901 FKBP7Q9Y680 259 aa13.02□□□□□ -0.33
LIG1-215ENST00000597901 PLCE1Q9P212 2302 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 HTR3EA5X5Y0 456 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 VWC2LB2RUY7 222 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 CXCR6O00574 342 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 NME4O00746 187 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 GSTA4O15217 222 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 ENTPD5O75356 428 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 TRMUO75648 421 aaKnown RBP13.01□□□□□ -0.33
LIG1-215ENST00000597901 RAB36O95755 333 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 SERPINA5P05154 406 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 ACADSP16219 412 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 USF1P22415 310 aaPredicted RBP13.01□□□□□ -0.33
LIG1-215ENST00000597901 PPOXP50336 477 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 SLC7A2P52569 658 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 MYBPC1Q00872 1141 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 ARMC4Q5T2S8 1044 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 HACD2Q6Y1H2 254 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 VTCN1Q7Z7D3 282 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 ASB10Q8WXI3 467 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 PRRC1Q96M27 445 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 SEPHS2Q99611 448 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 RHCGQ9UBD6 479 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 FBXL3Q9UKT7 428 aa13.01□□□□□ -0.33
LIG1-215ENST00000597901 LOC390937A0A1W2PQ73 354 aa13□□□□□ -0.33
LIG1-215ENST00000597901 A8MV72 311 aaPredicted RBP13□□□□□ -0.33
LIG1-215ENST00000597901 KIAA1324LA8MWY0 1029 aaPredicted RBP13□□□□□ -0.33
LIG1-215ENST00000597901 CENPBD1B2RD01 187 aa13□□□□□ -0.33
LIG1-215ENST00000597901 MCIDASD6RGH6 385 aa13□□□□□ -0.33
LIG1-215ENST00000597901 J3KTA2 159 aa13□□□□□ -0.33
LIG1-215ENST00000597901 NDUFS8O00217 210 aa13□□□□□ -0.33
LIG1-215ENST00000597901 FFAR1O14842 300 aa13□□□□□ -0.33
LIG1-215ENST00000597901 PIP5K1CO60331 668 aa13□□□□□ -0.33
LIG1-215ENST00000597901 FARS2O95363 451 aaKnown RBP13□□□□□ -0.33
LIG1-215ENST00000597901 ZNF682O95780 498 aa13□□□□□ -0.33
LIG1-215ENST00000597901 IGFBP1P08833 259 aaPredicted RBP13□□□□□ -0.33
LIG1-215ENST00000597901 IFI30P13284 250 aa13□□□□□ -0.33
LIG1-215ENST00000597901 GLRXP35754 106 aa13□□□□□ -0.33
LIG1-215ENST00000597901 NR4A2P43354 598 aa13□□□□□ -0.33
LIG1-215ENST00000597901 EVX1P49640 407 aa13□□□□□ -0.33
LIG1-215ENST00000597901 GSK3BP49841 420 aa13□□□□□ -0.33
LIG1-215ENST00000597901 DAP3P51398 398 aaKnown RBP13□□□□□ -0.33
LIG1-215ENST00000597901 SEC24CP53992 1094 aa13□□□□□ -0.33
LIG1-215ENST00000597901 VLDLRP98155 873 aa13□□□□□ -0.33
LIG1-215ENST00000597901 CARTPTQ16568 116 aa13□□□□□ -0.33
LIG1-215ENST00000597901 MSMPQ1L6U9 139 aa13□□□□□ -0.33
LIG1-215ENST00000597901 CBLL1Q75N03 491 aa13□□□□□ -0.33
LIG1-215ENST00000597901 ZNF584Q8IVC4 421 aa13□□□□□ -0.33
LIG1-215ENST00000597901 OR4K5Q8NGD3 323 aa13□□□□□ -0.33
LIG1-215ENST00000597901 NEU4Q8WWR8 484 aaPredicted RBP13□□□□□ -0.33
LIG1-215ENST00000597901 BPIFA2Q96DR5 249 aa13□□□□□ -0.33
LIG1-215ENST00000597901 FNDC11Q9BVV2 318 aa13□□□□□ -0.33
LIG1-215ENST00000597901 MYLK2Q9H1R3 596 aa13□□□□□ -0.33
LIG1-215ENST00000597901 RNF121Q9H920 327 aa13□□□□□ -0.33
LIG1-215ENST00000597901 MYOZ1Q9NP98 299 aaPredicted RBP13□□□□□ -0.33
LIG1-215ENST00000597901 ZANQ9Y493 2812 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
LIG1-215ENST00000597901 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 MGRN1O60291 552 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 IFNW1P05000 195 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 ADRA2AP08913 450 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 MAKP20794 623 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 ZNF84P51523 738 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 ZNF133P52736 654 aaPredicted RBP12.99□□□□□ -0.33
LIG1-215ENST00000597901 PRKCDQ05655 676 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 TRAM2Q15035 370 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 NRN1LQ496H8 165 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 IFI44LQ53G44 452 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 GKAP1Q5VSY0 366 aaPredicted RBP12.99□□□□□ -0.33
LIG1-215ENST00000597901 CYB5R2Q6BCY4 276 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 FKBP9P1Q75LS8 142 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 DPPA2Q7Z7J5 298 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 HIPK1Q86Z02 1210 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 CDK20Q8IZL9 346 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 HDAC2Q92769 488 aaKnown RBP12.99□□□□□ -0.33
LIG1-215ENST00000597901 MRPL24Q96A35 216 aaKnown RBP12.99□□□□□ -0.33
LIG1-215ENST00000597901 CMTM5Q96DZ9 223 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 MRPL37Q9BZE1 423 aaKnown RBP12.99□□□□□ -0.33
LIG1-215ENST00000597901 TXNIPQ9H3M7 391 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 MAN2C1Q9NTJ4 1040 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 ZNF346Q9UL40 294 aaKnown RBP12.99□□□□□ -0.33
LIG1-215ENST00000597901 HIF3AQ9Y2N7 669 aa12.99□□□□□ -0.33
LIG1-215ENST00000597901 NPIPB13A6NJU9 1138 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 NPIPB4C9JG80 1138 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 STAMBPO95630 424 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 SERPINA1P01009 418 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 IFNA2P01563 188 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 DAOP14920 347 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 NUDT2P50583 147 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 PSME3P61289 254 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 GALK2Q01415 458 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 GGTLC2Q14390 218 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 FXNQ16595 210 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 SLC36A2Q495M3 483 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 ALG10Q5BKT4 473 aa12.98□□□□□ -0.33
LIG1-215ENST00000597901 C10orf128Q5T292 105 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms