RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 REV1Q9UBZ9 1251 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 PTPN13Q12923 2485 aa12.63□□□□□ -0.39
VRK3-213ENST00000597215 SH3D21A4FU49 640 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 ZNF99A8MXY4 864 aaPredicted RBP12.62□□□□□ -0.39
VRK3-213ENST00000597215 BHLHE40O14503 412 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 SOCS2O14508 198 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 AHCYL1O43865 530 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 TP53P04637 393 aaPredicted RBP12.62□□□□□ -0.39
VRK3-213ENST00000597215 QDPRP09417 244 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 CDH2P19022 906 aaPredicted RBP12.62□□□□□ -0.39
VRK3-213ENST00000597215 SNTB1Q13884 538 aaKnown RBP12.62□□□□□ -0.39
VRK3-213ENST00000597215 RCN1Q15293 331 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 GABRA6Q16445 453 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 SLC36A3Q495N2 470 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 THEM4Q5T1C6 240 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 ANKRD34AQ69YU3 496 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 P2RY8Q86VZ1 359 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 JAZF1Q86VZ6 243 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 PARP8Q8N3A8 854 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 C17orf78Q8N4C9 275 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 OR1K1Q8NGR3 316 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 LINC01560Q8TB33 94 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 FAM222BQ8WU58 562 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 S100PBPQ96BU1 408 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 DACH2Q96NX9 599 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 RBP7Q96R05 134 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 RBM4BQ9BQ04 359 aaKnown RBP12.62□□□□□ -0.39
VRK3-213ENST00000597215 RBM4Q9BWF3 364 aaKnown RBP12.62□□□□□ -0.39
VRK3-213ENST00000597215 SMURF2Q9HAU4 748 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
VRK3-213ENST00000597215 ANKHD1Q8IWZ3 2542 aaKnown RBP12.62□□□□□ -0.39
VRK3-213ENST00000597215 PRSS37A4D1T9 235 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 OR5H1A6NKK0 313 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 DHHO43323 396 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 IGFBP1P08833 259 aaPredicted RBP12.61□□□□□ -0.39
VRK3-213ENST00000597215 IGFBP5P24593 272 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 COL8A1P27658 744 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 POU1F1P28069 291 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 HOXC12P31275 282 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 ZNF84P51523 738 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 ZNF133P52736 654 aaPredicted RBP12.61□□□□□ -0.39
VRK3-213ENST00000597215 ELF3P78545 371 aaPredicted RBP12.61□□□□□ -0.39
VRK3-213ENST00000597215 ARF1P84077 181 aaKnown RBP12.61□□□□□ -0.39
VRK3-213ENST00000597215 MYBPC1Q00872 1141 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 TIMM23BQ5SRD1 257 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 C10orf128Q5T292 105 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 KDM4DQ6B0I6 523 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 ANKRD16Q6P6B7 361 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 LRFN4Q6PJG9 635 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 SSX8Q7RTT4 187 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 LNX2Q8N448 690 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 HSD17B8Q92506 261 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 MCHR2Q969V1 340 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 NMD3Q96D46 503 aaKnown RBP12.61□□□□□ -0.39
VRK3-213ENST00000597215 ZNF837Q96EG3 531 aaPredicted RBP12.61□□□□□ -0.39
VRK3-213ENST00000597215 BOD1Q96IK1 185 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 MUS81Q96NY9 551 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 WFIKKN1Q96NZ8 548 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 CIB1Q99828 191 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 FOXB1Q99853 325 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 CRIM1Q9NZV1 1036 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 ENOPH1Q9UHY7 261 aa12.61□□□□□ -0.39
VRK3-213ENST00000597215 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
VRK3-213ENST00000597215 SLC22A23A1A5C7 686 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 H7C1C5 153 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 SLC2A10O95528 541 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 RENP00797 406 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 EPXP11678 715 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 ANPEPP15144 967 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 HIST1H1CP16403 213 aaKnown RBP12.6□□□□□ -0.39
VRK3-213ENST00000597215 LCN6P62502 163 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 ESRRGP62508 458 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 PPP2R2BQ00005 443 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 FMODQ06828 376 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 PGGHGQ32M88 737 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 SLC35F1Q5T1Q4 408 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 C1QTNF12Q5T7M4 302 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 SLC27A4Q6P1M0 643 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 SLC25A47Q6Q0C1 308 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 KLHL24Q6TFL4 600 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 PTCHD4Q6ZW05 846 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 OR4Q3Q8NH05 313 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 OR4K13Q8NH42 304 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 MUCL1Q96DR8 90 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 SNX18Q96RF0 628 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 C9orf16Q9BUW7 83 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 SLC17A5Q9NRA2 495 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 ZNF226Q9NYT6 803 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 VSX1Q9NZR4 365 aaPredicted RBP12.6□□□□□ -0.39
VRK3-213ENST00000597215 KCNN3Q9UGI6 736 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 PKDREJQ9NTG1 2253 aa12.6□□□□□ -0.39
VRK3-213ENST00000597215 H0YHG0 523 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 EI24O14681 340 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 CASKO14936 926 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 RRP9O43818 475 aaKnown RBP12.59□□□□□ -0.39
VRK3-213ENST00000597215 IFNGP01579 166 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
VRK3-213ENST00000597215 GRK5P34947 590 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 CDKN2AP42771 156 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms