RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FHL1Q13642 323 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 KEAP1Q14145 624 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 TESK1Q15569 626 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 ANKDD1AQ495B1 522 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 ARMC4Q5T2S8 1044 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 LRFN4Q6PJG9 635 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 SEZ6L2Q6UXD5 910 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 TMEM108Q6UXF1 575 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 CLDN22Q8N7P3 220 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 KBTBD8Q8NFY9 601 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 AKAP1Q92667 903 aaKnown RBP eCLIP9.69□□□□□ -0.86
LIG1-211ENST00000596457 POP5Q969H6 163 aaKnown RBP9.69□□□□□ -0.86
LIG1-211ENST00000596457 MCHR2Q969V1 340 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 ZNF570Q96NI8 536 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 RBP7Q96R05 134 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 FOXB1Q99853 325 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 NELFAQ9H3P2 528 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 CCM2LQ9NUG4 571 aaPredicted RBP9.69□□□□□ -0.86
LIG1-211ENST00000596457 ST6GALNAC2Q9UJ37 374 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 POU2F3Q9UKI9 436 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 SIGLEC7Q9Y286 467 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 ADAM18Q9Y3Q7 739 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 IER3IP1Q9Y5U9 82 aa9.69□□□□□ -0.86
LIG1-211ENST00000596457 ANKHD1Q8IWZ3 2542 aaKnown RBP9.68□□□□□ -0.86
LIG1-211ENST00000596457 XKRYO14609 159 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 PPP1R3DO95685 299 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 GASTP01350 101 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 CD14P08571 375 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 ZNF26P17031 533 aaPredicted RBP9.68□□□□□ -0.86
LIG1-211ENST00000596457 PTAFRP25105 342 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 CD40P25942 277 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 LIMS1P48059 325 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 NPRL3Q12980 569 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 SGCAQ16586 387 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 C1orf146Q5VVC0 180 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 PGBD2Q6P3X8 592 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 SMARCD3Q6STE5 483 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 SLC22A25Q6T423 547 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 THSD4Q6ZMP0 1018 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 SSX8Q7RTT4 187 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 MDP1Q86V88 176 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 DEPDC4Q8N2C3 294 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 LRRC18Q8N456 261 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 OR4C15Q8NGM1 316 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 FANK1Q8TC84 345 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
LIG1-211ENST00000596457 RASD2Q96D21 266 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 SAMD8Q96LT4 415 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 Q96M85 177 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 ERMAPQ96PL5 475 aaPredicted RBP9.68□□□□□ -0.86
LIG1-211ENST00000596457 SH3GL3Q99963 347 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 KCNS3Q9BQ31 491 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 IFT27Q9BW83 186 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 MRPL13Q9BYD1 178 aaKnown RBP9.68□□□□□ -0.86
LIG1-211ENST00000596457 LRMDAQ9H2I8 198 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 OR52D1Q9H346 318 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 RERGLQ9H628 205 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 RNF121Q9H920 327 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 STX18Q9P2W9 335 aaKnown RBP9.68□□□□□ -0.86
LIG1-211ENST00000596457 MAGED1Q9Y5V3 778 aaPredicted RBP9.68□□□□□ -0.86
LIG1-211ENST00000596457 ATP23Q9Y6H3 246 aa9.68□□□□□ -0.86
LIG1-211ENST00000596457 AKAP9Q99996 3911 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 ARPC4-TTLL3A0A0A6YYG9 625 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 IGHV1-18A0A0C4DH31 117 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 TEX13CA0A0J9YWL9 993 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 A0A1W2PPL8 197 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 TCRBV3S1A0A5B6 114 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 A6NIZ1 184 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 SOCS2O14508 198 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 FKBP6O75344 327 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 E2F6O75461 281 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 TIPRLO75663 272 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 IGHMP01871 453 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 HLA-HP01893 362 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 RAF1P04049 648 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 PATE4P0C8F1 98 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
LIG1-211ENST00000596457 CDAP32320 146 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 PTDSS1P48651 473 aaKnown RBP9.67□□□□□ -0.86
LIG1-211ENST00000596457 IDH3GP51553 393 aaPredicted RBP9.67□□□□□ -0.86
LIG1-211ENST00000596457 RPS6KA3P51812 740 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 HMGA2P52926 109 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 IST1P53990 364 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 CDH11P55287 796 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 FXYD6P3P58550 94 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 RAP1BP61224 184 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 RAP1AP62834 184 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 TSPAN31Q12999 210 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 MICAQ29983 383 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 RFX4Q33E94 735 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 C1orf94Q6P1W5 598 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 PAMR1Q6UXH9 720 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 SKA3Q8IX90 412 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 SLC22A24Q8N4F4 322 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 LINC00471Q8N535 108 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 ARIH2OSQ8N7S6 290 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 AQP11Q8NBQ7 271 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 LILRB1Q8NHL6 650 aaPredicted RBP9.67□□□□□ -0.86
LIG1-211ENST00000596457 ZNF519Q8TB69 540 aa9.67□□□□□ -0.86
LIG1-211ENST00000596457 MAGEE2Q8TD90 523 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms