RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 AQP12BA6NM10 295 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 GSC2O15499 205 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 OR10H3O60404 316 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 PTP4A3O75365 173 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 KRT36O76013 467 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 NDUFB2O95178 105 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 IGKV3-15P01624 115 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 IGLV1-44P01699 117 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 CD14P08571 375 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 RAP2AP10114 183 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 ACVR1BP36896 505 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 CAPZA2P47755 286 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 ZNF133P52736 654 aaPredicted RBP12.69□□□□□ -0.38
VRK3-206ENST00000594090 HMGA2P52926 109 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 FXYD6P3P58550 94 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 ERVK-25P63136 954 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 CD47Q08722 323 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 FLOT2Q14254 428 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 ZER1Q7Z7L7 766 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 MDP1Q86V88 176 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 AQP12AQ8IXF9 295 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 ADGRG5Q8IZF4 528 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 IGFBPL1Q8WX77 278 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 NMD3Q96D46 503 aaKnown RBP12.69□□□□□ -0.38
VRK3-206ENST00000594090 GPX7Q96SL4 187 aaPredicted RBP12.69□□□□□ -0.38
VRK3-206ENST00000594090 ALG12Q9BV10 488 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 CADM1Q9BY67 442 aaKnown RBP12.69□□□□□ -0.38
VRK3-206ENST00000594090 TMEM38BQ9NVV0 291 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 BEX4Q9NWD9 120 aaPredicted RBP12.69□□□□□ -0.38
VRK3-206ENST00000594090 ZNF224Q9NZL3 707 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 POU2F3Q9UKI9 436 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 ADAM18Q9Y3Q7 739 aa12.69□□□□□ -0.38
VRK3-206ENST00000594090 OTOGQ6ZRI0 2925 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 AKAP6Q13023 2319 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 UNC119BA6NIH7 251 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 A6NIZ1 184 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 TNFRSF11BO00300 401 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 ATP5HO75947 161 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 HLA-HP01893 362 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 CELA3BP08861 270 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 CECR9P0C854 216 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 NR2C1P13056 603 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 CBR1P16152 277 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 FPR3P25089 353 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 IFNGR2P38484 337 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 RASSF2P50749 326 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 ZNF84P51523 738 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 IDH3GP51553 393 aaPredicted RBP12.68□□□□□ -0.38
VRK3-206ENST00000594090 RAP1BP61224 184 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 RAP1AP62834 184 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 FMODQ06828 376 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 C10orf128Q5T292 105 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 B3GLCTQ6Y288 498 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 FAM122BQ7Z309 247 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 SLC22A24Q8N4F4 322 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 ARIH2OSQ8N7S6 290 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 OR4C15Q8NGM1 316 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 FANK1Q8TC84 345 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 NANOS1Q8WY41 292 aaKnown RBP12.68□□□□□ -0.38
VRK3-206ENST00000594090 SEC61A2Q9H9S3 476 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 SMURF2Q9HAU4 748 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 NOX3Q9HBY0 568 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 B3GNT2Q9NY97 397 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
VRK3-206ENST00000594090 IL20RAQ9UHF4 553 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 POMPQ9Y244 141 aa12.68□□□□□ -0.38
VRK3-206ENST00000594090 SPG11Q96JI7 2443 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 DSCAMO60469 2012 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 IGKV1D-43A0A0B4J1Z2 117 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 DHRS12A0PJE2 317 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 ATP6V1G2-DDX39BF2Z307 99 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 ENTPD5O75356 428 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 SLC2A10O95528 541 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 SOD3P08294 240 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 CD79AP11912 226 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 GSSP48637 474 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 NAAAQ02083 359 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 NPRL3Q12980 569 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 GSG1Q2KHT4 349 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 PGGHGQ32M88 737 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 MESTQ5EB52 335 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 OR2T5Q6IEZ7 315 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 C1orf94Q6P1W5 598 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 PGBD2Q6P3X8 592 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 MYPOPQ86VE0 399 aaPredicted RBP12.67□□□□□ -0.38
VRK3-206ENST00000594090 CLDN22Q8N7P3 220 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 OR2T29Q8NH02 315 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 FNDC8Q8TC99 324 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 SMAP2Q8WU79 429 aaPredicted RBP12.67□□□□□ -0.38
VRK3-206ENST00000594090 CANT1Q8WVQ1 401 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 HTRA1Q92743 480 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 Q96M85 177 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 ZNF570Q96NI8 536 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 VNN3Q9NY84 501 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 GRHPRQ9UBQ7 328 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 SLC7A8Q9UHI5 535 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 MOKQ9UQ07 419 aa12.67□□□□□ -0.38
VRK3-206ENST00000594090 E7EQL1 145 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms