RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RBMXL3Q8N7X1 1067 aaKnown RBP12□□□□□ -0.49
VMP1-217ENST00000593168 OR9Q1Q8NGQ5 310 aa12□□□□□ -0.49
VMP1-217ENST00000593168 OR2T4Q8NH00 348 aa12□□□□□ -0.49
VMP1-217ENST00000593168 OR10D3Q8NH80 312 aa12□□□□□ -0.49
VMP1-217ENST00000593168 ZPLD1Q8TCW7 415 aa12□□□□□ -0.49
VMP1-217ENST00000593168 FAR1Q8WVX9 515 aa12□□□□□ -0.49
VMP1-217ENST00000593168 FCGR1BQ92637 280 aa12□□□□□ -0.49
VMP1-217ENST00000593168 KISS1RQ969F8 398 aaPredicted RBP12□□□□□ -0.49
VMP1-217ENST00000593168 CPNE4Q96A23 557 aaPredicted RBP12□□□□□ -0.49
VMP1-217ENST00000593168 TXNDC15Q96J42 360 aa12□□□□□ -0.49
VMP1-217ENST00000593168 JAM3Q9BX67 310 aa12□□□□□ -0.49
VMP1-217ENST00000593168 SRXN1Q9BYN0 137 aa12□□□□□ -0.49
VMP1-217ENST00000593168 DEFB127Q9H1M4 99 aa12□□□□□ -0.49
VMP1-217ENST00000593168 LDAHQ9H6V9 325 aa12□□□□□ -0.49
VMP1-217ENST00000593168 ASB6Q9NWX5 421 aa12□□□□□ -0.49
VMP1-217ENST00000593168 NDUFA13Q9P0J0 144 aa12□□□□□ -0.49
VMP1-217ENST00000593168 EXOSC1Q9Y3B2 195 aaKnown RBP12□□□□□ -0.49
VMP1-217ENST00000593168 FKBP7Q9Y680 259 aa12□□□□□ -0.49
VMP1-217ENST00000593168 COMMD3-BMI1R4GMX3 469 aa12□□□□□ -0.49
VMP1-217ENST00000593168 ALPK2Q86TB3 2170 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 A0A1B0GVC2 190 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 SMIM31A0A1B0GVY4 71 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 CENPBD1B2RD01 187 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 J3QRE1 110 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 TFECO14948 347 aaPredicted RBP11.99□□□□□ -0.49
VMP1-217ENST00000593168 SMAD9O15198 467 aaKnown RBP11.99□□□□□ -0.49
VMP1-217ENST00000593168 CXCL13O43927 109 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 RAMP1O60894 148 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 GLCEO94923 617 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 IGHA1P01876 353 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 ADRA2AP08913 450 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 SBK2P0C263 348 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 CPN1P15169 458 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 TTKP33981 857 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 ATP6V1E1P36543 226 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 MAP2K4P45985 399 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 CENPAP49450 140 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 SLC16A1P53985 500 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 PMP22Q01453 160 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 MELKQ14680 651 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 INAQ16352 499 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 LINC01590Q5TEZ4 76 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 EEF1A1P5Q5VTE0 462 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 UBE2UQ5VVX9 321 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 CREB3L2Q70SY1 520 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 GPAT4Q86UL3 456 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 UBQLNLQ8IYU4 475 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 PROKR2Q8NFJ6 384 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 OR4F15Q8NGB8 312 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 OR6X1Q8NH79 312 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 RORBQ92753 470 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 MUL1Q969V5 352 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 ADAD1Q96M93 576 aaKnown RBP11.99□□□□□ -0.49
VMP1-217ENST00000593168 UCN2Q96RP3 112 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 ALG12Q9BV10 488 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 SYT4Q9H2B2 425 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 RPRD1BQ9NQG5 326 aaKnown RBP11.99□□□□□ -0.49
VMP1-217ENST00000593168 CHCHD3Q9NX63 227 aaKnown RBP11.99□□□□□ -0.49
VMP1-217ENST00000593168 MED29Q9NX70 200 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 KLHL13Q9P2N7 655 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 TNFRSF10DQ9UBN6 386 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 ERGIC3Q9Y282 383 aa11.99□□□□□ -0.49
VMP1-217ENST00000593168 ANKRD17O75179 2603 aaKnown RBP11.98□□□□□ -0.49
VMP1-217ENST00000593168 SLC22A23A1A5C7 686 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 ZNF99A8MXY4 864 aaPredicted RBP11.98□□□□□ -0.49
VMP1-217ENST00000593168 H7C1C5 153 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 TRMUO75648 421 aaKnown RBP11.98□□□□□ -0.49
VMP1-217ENST00000593168 GYPBP06028 91 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 MYL12AP19105 171 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 KLK2P20151 261 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 CRABP1P29762 137 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 BLVRAP53004 296 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 BIDP55957 195 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 LCN6P62502 163 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 RUNX1T1Q06455 604 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 SLC17A1Q14916 467 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 SYT6Q5T7P8 510 aaPredicted RBP11.98□□□□□ -0.49
VMP1-217ENST00000593168 GPR141Q7Z602 305 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 ZBTB46Q86UZ6 589 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 SATL1Q86VE3 508 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 PM20D2Q8IYS1 436 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 OR6V1Q8N148 313 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 NANOGP1Q8N7R0 232 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 POMGNT2Q8NAT1 580 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 OR9K2Q8NGE7 335 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 OR51G2Q8NGK0 314 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 FNDC8Q8TC99 324 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 ZNRF4Q8WWF5 429 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 TMIGD2Q96BF3 282 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 SLC25A44Q96H78 314 aaPredicted RBP11.98□□□□□ -0.49
VMP1-217ENST00000593168 RBP7Q96R05 134 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 KCNK17Q96T54 332 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 TIMP4Q99727 224 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 MRPL13Q9BYD1 178 aaKnown RBP11.98□□□□□ -0.49
VMP1-217ENST00000593168 FAM192AQ9GZU8 254 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 NUAK2Q9H093 628 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 EXO5Q9H790 373 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 ADGRL4Q9HBW9 690 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 SRA1Q9HD15 236 aaKnown RBP11.98□□□□□ -0.49
VMP1-217ENST00000593168 INPP5EQ9NRR6 644 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms