RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 H2AFY2Q9P0M6 372 aaPredicted RBP10.57□□□□□ -0.72
DDX39A-219ENST00000592927 IL20RAQ9UHF4 553 aa10.57□□□□□ -0.72
DDX39A-219ENST00000592927 PSORS1C1Q9UIG5 152 aa10.57□□□□□ -0.72
DDX39A-219ENST00000592927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDX39A-219ENST00000592927 B3GALT5Q9Y2C3 310 aa10.57□□□□□ -0.72
DDX39A-219ENST00000592927 RPL36Q9Y3U8 105 aaKnown RBP10.57□□□□□ -0.72
DDX39A-219ENST00000592927 SNX5Q9Y5X3 404 aa10.57□□□□□ -0.72
DDX39A-219ENST00000592927 ACANP16112 2415 aa10.57□□□□□ -0.72
DDX39A-219ENST00000592927 KIAA1549Q9HCM3 1950 aa10.57□□□□□ -0.72
DDX39A-219ENST00000592927 PRRC2AP48634 2157 aaKnown RBP10.56□□□□□ -0.72
DDX39A-219ENST00000592927 NPIPB13A6NJU9 1138 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 HSPB2A8KAH6 182 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 NPIPB4C9JG80 1138 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 MCIDASD6RGH6 385 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 PLPP3O14495 311 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 RGS10O43665 173 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 XPNPEP2O43895 674 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 ENTPD6O75354 484 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 SMNDC1O75940 238 aaKnown RBP eCLIP10.56□□□□□ -0.729e-7■■□□□ 12.6
DDX39A-219ENST00000592927 AQP8O94778 261 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 PLGP00747 810 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-219ENST00000592927 ADORA3P0DMS8 318 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 PAICSP22234 425 aaKnown RBP10.56□□□□□ -0.72
DDX39A-219ENST00000592927 NR1H2P55055 460 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 CTXN1P60606 82 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 PMS2P3Q13401 168 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 RNPS1Q15287 305 aaKnown RBP10.56□□□□□ -0.72
DDX39A-219ENST00000592927 HSPB2Q16082 182 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 SMN1Q16637 294 aaKnown RBP10.56□□□□□ -0.72
DDX39A-219ENST00000592927 ARMC4Q5T2S8 1044 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 AADACL4Q5VUY2 407 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 PAQR6Q6TCH4 344 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 NCCRP1Q6ZVX7 275 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-219ENST00000592927 H1FNTQ75WM6 255 aaPredicted RBP10.56□□□□□ -0.72
DDX39A-219ENST00000592927 PRSS48Q7RTY5 328 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 BIVMQ86UB2 503 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 ZGRF1Q86YA3 2104 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 ACBD4Q8NC06 268 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 MOSPD2Q8NHP6 518 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 ZFP3Q96NJ6 502 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 RNF122Q9H9V4 155 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 VCX3AQ9NNX9 186 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 FKBP14Q9NWM8 211 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 TAS2R5Q9NYW4 299 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 AASSQ9UDR5 926 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 IER3IP1Q9Y5U9 82 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 NBEAL1Q6ZS30 2694 aa10.56□□□□□ -0.72
DDX39A-219ENST00000592927 GTF3C1Q12789 2109 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 MYO7BQ6PIF6 2116 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 MAP1AP78559 2803 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 A0A0G2JNJ9 132 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 PTGES3LE9PB15 166 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 PRR23D1E9PI22 279 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 M0R082 166 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 M0R129 80 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 SMAD9O15198 467 aaKnown RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 RNF13O43567 381 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 CYTIPO60759 359 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 TOXO94900 526 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 AKR7A3O95154 331 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 IGHMP01871 453 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 PRR23D2P0DMB1 279 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 TMIGD3P0DMS9 266 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 ATP6V1B1P15313 513 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 SDHAP31040 664 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 CEACAM8P31997 349 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 SLC15A1P46059 708 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 RPL5P46777 297 aaKnown RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 H3F3AP84243 136 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 PUDPQ08623 228 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 RASGEF1BQ0VAM2 473 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 KLHL22Q53GT1 634 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 FAM122BQ7Z309 247 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 ZNF417Q8TAU3 575 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 RNF128Q8TEB7 428 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 ABHD3Q8WU67 409 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 GGHQ92820 318 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 INTS12Q96CB8 462 aaKnown RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 ZNF582Q96NG8 517 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 SNX18Q96RF0 628 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 ZNF587Q96SQ5 575 aaPredicted RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 COPS4Q9BT78 406 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 KATNB1Q9BVA0 655 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 INIPQ9NRY2 104 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 GLRX2Q9NS18 164 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 MRPS18AQ9NVS2 196 aaKnown RBP10.55□□□□□ -0.72
DDX39A-219ENST00000592927 COQ3Q9NZJ6 369 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 DNAJC27Q9NZQ0 273 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 KLHL9Q9P2J3 617 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 Q9UFV3 132 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 PCDHGB1Q9Y5G3 927 aa10.55□□□□□ -0.72
DDX39A-219ENST00000592927 A0A1W2PNV4 684 aa10.54□□□□□ -0.72
DDX39A-219ENST00000592927 A0A1W2PRG6 482 aa10.54□□□□□ -0.72
DDX39A-219ENST00000592927 AQP7P3A6NL99 342 aa10.54□□□□□ -0.72
DDX39A-219ENST00000592927 VAMP5O95183 116 aa10.54□□□□□ -0.72
DDX39A-219ENST00000592927 SLC2A10O95528 541 aa10.54□□□□□ -0.72
DDX39A-219ENST00000592927 CDK1P06493 297 aa10.54□□□□□ -0.72
DDX39A-219ENST00000592927 CRHP06850 196 aa10.54□□□□□ -0.72
DDX39A-219ENST00000592927 CTSSP25774 331 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms