RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 HTR3EA5X5Y0 456 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 RNF13O43567 381 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 SERPINI2O75830 405 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 FAM107AO95990 144 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 IGKV3-15P01624 115 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 HIST1H2ABP04908 130 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 UMPSP11172 480 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 FUT1P19526 365 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 UBE2NP61088 152 aaKnown RBP9.75□□□□□ -0.85
SMAD4-211ENST00000590499 TUBA1BP68363 451 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 TUBA4AP68366 448 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 FHL1Q13642 323 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 KRT72Q14CN4 511 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 TRAM2Q15035 370 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 GLYATQ6IB77 296 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 C11orf71Q6IPW1 123 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 SLC22A25Q6T423 547 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 TUBA1AQ71U36 451 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 HIST3H2AQ7L7L0 130 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 FITM2Q8N6M3 262 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 RNF148Q8N7C7 305 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 FAM86B1Q8N7N1 296 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 FAM156AQ8NDB6 213 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 HIST1H2ACQ93077 130 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 FAM162AQ96A26 154 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 SLC38A2Q96QD8 506 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 GORASP2Q9H8Y8 452 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 SEC61A2Q9H9S3 476 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 DCAF13Q9NV06 445 aaKnown RBP9.75□□□□□ -0.85
SMAD4-211ENST00000590499 RHCGQ9UBD6 479 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 RPS6KA6Q9UK32 745 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 ENPP4Q9Y6X5 453 aa9.75□□□□□ -0.85
SMAD4-211ENST00000590499 NPIPB13A6NJU9 1138 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF726A6NNF4 738 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 NPIPB4C9JG80 1138 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ATP6V1G2-DDX39BF2Z307 99 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 BLOC1S5-TXNDC5H3BN57 136 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ARHGEF9O43307 516 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 SEC14L2O76054 403 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 SEMG1P04279 462 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 F13BP05160 661 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 CECR9P0C854 216 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 PGA4P0DJD7 388 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 PGA3P0DJD8 388 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 AQP2P41181 271 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 CSNK1A1P48729 337 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 RUNX1T1Q06455 604 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 MELKQ14680 651 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 HIST3H3Q16695 136 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 IQCCQ4KMZ1 466 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 SAMD4BQ5PRF9 694 aaKnown RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 FKBP9P1Q75LS8 142 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 YTHDF3Q7Z739 585 aaKnown RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 MYPOPQ86VE0 399 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 NRMQ8IXM6 262 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 OR6N1Q8NGY5 312 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 MOSPD2Q8NHP6 518 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ASB10Q8WXI3 467 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ACOT11Q8WXI4 607 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 BPIFA2Q96DR5 249 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 SLC25A44Q96H78 314 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 C7orf34Q96L11 122 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 DHRS9Q9BPW9 319 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 KATNB1Q9BVA0 655 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 FNDC11Q9BVV2 318 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 MRPL13Q9BYD1 178 aaKnown RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ULBP2Q9BZM5 246 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ANKRD19PQ9H560 264 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 MOV10Q9HCE1 1003 aaKnown RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 B3GAT2Q9NPZ5 323 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 B3GNT2Q9NY97 397 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 GLTPQ9NZD2 209 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF224Q9NZL3 707 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 NDUFAF4Q9P032 175 aa9.74□□□□□ -0.85
SMAD4-211ENST00000590499 ANK3Q12955 4377 aaKnown RBP9.74□□□□□ -0.85
SMAD4-211ENST00000590499 A0A087WUU8 490 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 CENPBD1B2RD01 187 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 BCL10O95999 233 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 CELA3BP08861 270 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 IFI30P13284 250 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 B4GALT1P15291 398 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 FOSL1P15407 271 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 CBR1P16152 277 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 MAKP20794 623 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 IFNA8P32881 189 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 TTKP33981 857 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 CDKN1AP38936 164 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF133P52736 654 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-211ENST00000590499 ATP5J2P56134 94 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 VLDLRP98155 873 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 NAAAQ02083 359 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 PRKCDQ05655 676 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 SPATS1Q496A3 300 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 ARMC4Q5T2S8 1044 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 LCE4AQ5TA78 99 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 GKAP1Q5VSY0 366 aaPredicted RBP9.73□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF544Q6NX49 715 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 LRFN4Q6PJG9 635 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 ZNF813Q6ZN06 617 aa9.73□□□□□ -0.85
SMAD4-211ENST00000590499 CCDC36Q8IYA8 594 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms