RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 TTMPQ5BVD1 217 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 SNX33Q8WV41 574 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 RAB1CQ92928 201 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 SLC38A4Q969I6 547 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 LRR1Q96L50 414 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 DCLRE1CQ96SD1 692 aaKnown RBP12.78□□□□□ -0.36
SF3A2-204ENST00000589118 WFDC6Q9BQY6 131 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 B3GAT2Q9NPZ5 323 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 NUP50Q9UKX7 468 aa12.78□□□□□ -0.36
SF3A2-204ENST00000589118 MDFIC2A0A1B0GVS7 189 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 HMGB1P1B2RPK0 211 aaPredicted RBP12.77□□□□□ -0.37
SF3A2-204ENST00000589118 OR2T1O43869 369 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 TPST1O60507 370 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 KRT75O95678 551 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 IGHV1-46P01743 117 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 AHCYP23526 432 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 LSP1P33241 339 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 BIDP55957 195 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 PMS2P3Q13401 168 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 SLC9A3R2Q15599 337 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 ARMCX4Q5H9R4 360 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 SPATA46Q5T0L3 261 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 HIST2H2BDQ6DRA6 164 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 RETREG3Q86VR2 466 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 SLC22A24Q8N4F4 322 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 GLB1L3Q8NCI6 653 aaPredicted RBP12.77□□□□□ -0.37
SF3A2-204ENST00000589118 SLC41A3Q96GZ6 507 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 C7orf26Q96N11 449 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 RNF121Q9H920 327 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 SAP30LQ9HAJ7 183 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 CDH20Q9HBT6 801 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 NPHS2Q9NP85 383 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 AIG1Q9NVV5 245 aa12.77□□□□□ -0.37
SF3A2-204ENST00000589118 WNK1Q9H4A3 2382 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 A0A0G2JPF8 293 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 HNRNPCL2B2RXH8 293 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 HNRNPCL3B7ZW38 293 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 RFXANKO14593 260 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 HNRNPCL1O60812 293 aaKnown RBP12.76□□□□□ -0.37
SF3A2-204ENST00000589118 RNASE1P07998 156 aaKnown RBP12.76□□□□□ -0.37
SF3A2-204ENST00000589118 SBK2P0C263 348 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 HNRNPCL4P0DMR1 293 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 MPV17P39210 176 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 CSNK1A1P48729 337 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 UCP2P55851 309 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 MELKQ14680 651 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 PCGF3Q3KNV8 242 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 ALG10BQ5I7T1 473 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 LRFN4Q6PJG9 635 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 C6orf89Q6UWU4 347 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 C1QL4Q86Z23 238 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 C10orf53Q8N6V4 93 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 GOLGA6L1Q8N7Z2 621 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 OR1J1Q8NGS3 322 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 ZNF519Q8TB69 540 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 GEMIN6Q8WXD5 167 aaKnown RBP12.76□□□□□ -0.37
SF3A2-204ENST00000589118 C11orf40Q8WZ69 217 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 WDR55Q9H6Y2 383 aaPredicted RBP12.76□□□□□ -0.37
SF3A2-204ENST00000589118 TPT1P8Q9HAU6 139 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 TNFRSF19Q9NS68 423 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 NKIRAS2Q9NYR9 191 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 CALML5Q9NZT1 146 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 EGFL7Q9UHF1 273 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 GPR45Q9Y5Y3 372 aa12.76□□□□□ -0.37
SF3A2-204ENST00000589118 PLPP3O14495 311 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 UBOX5O94941 541 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 IGHV4-38-2P0DP08 117 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 DRD4P21917 467 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 CCNOP22674 350 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 EPHA3P29320 983 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 ZNF81P51508 661 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 SELENOVP59797 346 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 IL13RA1P78552 427 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 TEKQ02763 1124 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 ZNF154Q13106 437 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 MAVSQ7Z434 540 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 NET1Q7Z628 596 aaPredicted RBP12.75□□□□□ -0.37
SF3A2-204ENST00000589118 KIR3DL3Q8N743 410 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 OR4K5Q8NGD3 323 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 ST7LQ8TDW4 575 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 TMEM54Q969K7 222 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 TMIGD2Q96BF3 282 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 TIMD4Q96H15 378 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 PKP2Q99959 881 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 SLCO1C1Q9NYB5 712 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 PLEK2Q9NYT0 353 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 ARMCX1Q9P291 453 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 PURGQ9UJV8 347 aaKnown RBP12.75□□□□□ -0.37
SF3A2-204ENST00000589118 AUP1Q9Y679 476 aa12.75□□□□□ -0.37
SF3A2-204ENST00000589118 ZSCAN5BA6NJL1 495 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 POM121CA8CG34 1229 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 TPST2O60704 377 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 ANP32DO95626 131 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 GATA3P23771 443 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 ATP4BP51164 291 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 KRTAP10-3P60369 221 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 TXNL4AP83876 142 aaKnown RBP12.74□□□□□ -0.37
SF3A2-204ENST00000589118 PUDPQ08623 228 aa12.74□□□□□ -0.37
SF3A2-204ENST00000589118 LRRC74AQ0VAA2 488 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms