RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 SPAG4Q9NPE6 437 aa16.94■□□□□ 0.3
TPM4-208ENST00000588410 TMEM38BQ9NVV0 291 aa16.94■□□□□ 0.3
TPM4-208ENST00000588410 ADA2Q9NZK5 511 aa16.94■□□□□ 0.3
TPM4-208ENST00000588410 RPS6KA6Q9UK32 745 aa16.94■□□□□ 0.3
TPM4-208ENST00000588410 SNX13Q9Y5W8 968 aa16.94■□□□□ 0.3
TPM4-208ENST00000588410 ZFHX3Q15911 3703 aa16.94■□□□□ 0.3
TPM4-208ENST00000588410 J3KTA2 159 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 SAGP10523 405 aaPredicted RBP16.93■□□□□ 0.3
TPM4-208ENST00000588410 ACADSP16219 412 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 SLC25A16P16260 332 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 NCK1P16333 377 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 GNGT1P63211 74 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 MYBPC1Q00872 1141 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 GALK2Q01415 458 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 LAPTM4AQ15012 233 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 ALG10Q5BKT4 473 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 GKAP1Q5VSY0 366 aaPredicted RBP16.93■□□□□ 0.3
TPM4-208ENST00000588410 DPPA2Q7Z7J5 298 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 CDK20Q8IZL9 346 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 SYT14Q8NB59 555 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 MCHR2Q969V1 340 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 ZNF347Q96SE7 839 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 PLK3Q9H4B4 646 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 RNF121Q9H920 327 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 ABCD2Q9UBJ2 740 aa16.93■□□□□ 0.3
TPM4-208ENST00000588410 INAFM1C9JVW0 142 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 hCG_2039718K7EN88 272 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 TRMUO75648 421 aaKnown RBP16.92■□□□□ 0.3
TPM4-208ENST00000588410 ERCC1P07992 297 aaPredicted RBP16.92■□□□□ 0.3
TPM4-208ENST00000588410 PATE4P0C8F1 98 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 NR2C1P13056 603 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 ZNF14P17017 642 aaPredicted RBP16.92■□□□□ 0.3
TPM4-208ENST00000588410 NR4A1P22736 598 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 RUNX1T1Q06455 604 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 TOP3AQ13472 1001 aaPredicted RBP16.92■□□□□ 0.3
TPM4-208ENST00000588410 RAB39AQ14964 217 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 TAF11Q15544 211 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 TMEM53Q6P2H8 277 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 ZNF730Q6ZMV8 503 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 RRM2BQ7LG56 351 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 NRMQ8IXM6 262 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 OR4K5Q8NGD3 323 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 SORCS2Q96PQ0 1159 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 SH3GL3Q99963 347 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 MRPL13Q9BYD1 178 aaKnown RBP16.92■□□□□ 0.3
TPM4-208ENST00000588410 RAB1BQ9H0U4 201 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 DYNLRB1Q9NP97 96 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 ZNF224Q9NZL3 707 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 HIF3AQ9Y2N7 669 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 FAM32AQ9Y421 112 aaKnown RBP16.92■□□□□ 0.3
TPM4-208ENST00000588410 CMAHPQ9Y471 501 aa16.92■□□□□ 0.3
TPM4-208ENST00000588410 EFCAB9A8MZ26 197 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 LY6HO94772 140 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 PPOXP50336 477 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 PDLIM4P50479 330 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 GYS2P54840 703 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 CARTPTQ16568 116 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 HIST3H3Q16695 136 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 SLC36A2Q495M3 483 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 ARMC4Q5T2S8 1044 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 GLYATQ6IB77 296 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 SLC16A14Q7RTX9 510 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 RNF113BQ8IZP6 322 aaKnown RBP16.91■□□□□ 0.3
TPM4-208ENST00000588410 SVOPLQ8N434 492 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 ANKS4BQ8N8V4 417 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 OR51A7Q8NH64 312 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 ACOT11Q8WXI4 607 aaPredicted RBP16.91■□□□□ 0.3
TPM4-208ENST00000588410 KCNN2Q9H2S1 579 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 TXNIPQ9H3M7 391 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 MAN2C1Q9NTJ4 1040 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 EGFL7Q9UHF1 273 aa16.91■□□□□ 0.3
TPM4-208ENST00000588410 NPIPB13A6NJU9 1138 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 NPIPB4C9JG80 1138 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 FFAR1O14842 300 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 SERPINA5P05154 406 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 TSPAN19P0C672 248 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 ZNF35P13682 527 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 MAKP20794 623 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 RPS23P62266 143 aaKnown RBP16.9■□□□□ 0.3
TPM4-208ENST00000588410 LSM11P83369 360 aaKnown RBP eCLIP16.9■□□□□ 0.32e-6■□□□□ 9.8
TPM4-208ENST00000588410 PRKCDQ05655 676 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 CD47Q08722 323 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 ANKDD1AQ495B1 522 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 NRN1LQ496H8 165 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 MBOAT2Q6ZWT7 520 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 OAFQ86UD1 273 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 FGFBP3Q8TAT2 258 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 C10orf105Q8TEF2 133 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 ZNF75AQ96N20 296 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 SEPHS2Q99611 448 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 MYOZ1Q9NP98 299 aaPredicted RBP16.9■□□□□ 0.3
TPM4-208ENST00000588410 SAMD4AQ9UPU9 718 aaKnown RBP16.9■□□□□ 0.3
TPM4-208ENST00000588410 ARL2BPQ9Y2Y0 163 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 ENPP4Q9Y6X5 453 aa16.9■□□□□ 0.3
TPM4-208ENST00000588410 TRAV27A0A087WT01 109 aa16.89■□□□□ 0.29
TPM4-208ENST00000588410 SH3PXD2BA1X283 911 aa16.89■□□□□ 0.29
TPM4-208ENST00000588410 MGRN1O60291 552 aa16.89■□□□□ 0.29
TPM4-208ENST00000588410 PTHP01270 115 aa16.89■□□□□ 0.29
TPM4-208ENST00000588410 FUT4P22083 530 aa16.89■□□□□ 0.29
TPM4-208ENST00000588410 CTXN1P60606 82 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms