RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SMNDC1O75940 238 aaKnown RBP eCLIP13.23□□□□□ -0.29
NFIX-208ENST00000587260 ZNF432O94892 652 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 DBTP11182 482 aaKnown RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 NUDT6P53370 316 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 CLDN17P56750 224 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 SIRPAP78324 504 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 ZNF91Q05481 1191 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 RUNX1T1Q06455 604 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 HIST3H3Q16695 136 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 ZBTB46Q86UZ6 589 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 WDFY1Q8IWB7 410 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 FNDC8Q8TC99 324 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 TMEM45BQ96B21 275 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 INTS12Q96CB8 462 aaKnown RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 EMC6Q9BV81 110 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 MED20Q9H944 212 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 BCO1Q9HAY6 547 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 GP6Q9HCN6 339 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 PAK1IP1Q9NWT1 392 aaPredicted RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 MOKQ9UQ07 419 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 RCE1Q9Y256 329 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 FKBP7Q9Y680 259 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 MBD3L4A6NDZ8 208 aaPredicted RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 MBD3L3A6NE82 208 aaPredicted RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 CCDC182A6NF36 153 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 MBD3L5A6NJ08 208 aaPredicted RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 ZNF724A8MTY0 619 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 GPR171O14626 319 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 AKAP8O43823 692 aaKnown RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 IGHG1P01857 330 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 PGA4P0DJD7 388 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 PGA3P0DJD8 388 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 SPI1P17947 270 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 GNLYP22749 145 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 CA7P43166 264 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 MTNR1AP48039 350 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 PER3P56645 1201 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 LGALS3BPQ08380 585 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 RAB40BQ12829 278 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 APOFQ13790 326 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 GTF2IRD2BQ6EKJ0 949 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 GTF2IRD2Q86UP8 949 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 TSPAN14Q8NG11 270 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 OR2T4Q8NH00 348 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 MBD3L2Q8NHZ7 208 aaPredicted RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 KISS1RQ969F8 398 aaPredicted RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 MYDGFQ969H8 173 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 NMD3Q96D46 503 aaKnown RBP13.23□□□□□ -0.29
NFIX-208ENST00000587260 TM9SF2Q99805 663 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 TTYH2Q9BSA4 534 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 SYT4Q9H2B2 425 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 ASB6Q9NWX5 421 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 EMC3Q9P0I2 261 aa13.23□□□□□ -0.29
NFIX-208ENST00000587260 A0A087WXM4 84 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 IRGMA1A4Y4 181 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 ZNF726A6NNF4 738 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 PTGES3LE9PB15 166 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 H7C1C5 153 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 TOXO94900 526 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 GLI4P10075 376 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 AGTR1P30556 359 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 CENPAP49450 140 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 LCN6P62502 163 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 TUBA4AP68366 448 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 GGTLC2Q14390 218 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 THEM4Q5T1C6 240 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 LINC01590Q5TEZ4 76 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 CARD17Q5XLA6 110 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 TMEM123Q8N131 208 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 OR6V1Q8N148 313 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 CNEP1R1Q8N9A8 125 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 NAXEQ8NCW5 288 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 GALNT11Q8NCW6 608 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 OR9Q1Q8NGQ5 310 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 OTULINQ96BN8 352 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 GMPPAQ96IJ6 420 aaPredicted RBP13.22□□□□□ -0.29
NFIX-208ENST00000587260 OR2M2Q96R28 347 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 RHNO1Q9BSD3 238 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 NUAK2Q9H093 628 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 OR51V1Q9H2C8 321 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 C12orf49Q9H741 205 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 RPRD1BQ9NQG5 326 aaKnown RBP13.22□□□□□ -0.29
NFIX-208ENST00000587260 B9D1Q9UPM9 204 aa13.22□□□□□ -0.29
NFIX-208ENST00000587260 EXOGQ9Y2C4 368 aaKnown RBP13.22□□□□□ -0.29
NFIX-208ENST00000587260 DCTN6O00399 190 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 SS18L1O75177 396 aaPredicted RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 GLCEO94923 617 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 CDK1P06493 297 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 YES1P07947 543 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 HTR1AP08908 422 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 HOXD4P09016 255 aaPredicted RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 SMIM18P0DKX4 95 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 TMIGD3P0DMS9 266 aaPredicted RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 CLUP10909 449 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 NR2C1P13056 603 aa13.21□□□□□ -0.29
NFIX-208ENST00000587260 EEF1B2P24534 225 aaKnown RBP13.21□□□□□ -0.29
NFIX-208ENST00000587260 CRABP1P29762 137 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms