RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PTP4A3O75365 173 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 ZNF432O94892 652 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 WNT11O96014 354 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 IFNGP01579 166 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 IGHMP01871 453 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 QDPRP09417 244 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 TSPAN19P0C672 248 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 IGHV1-2P23083 117 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 EDNRAP25101 427 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 NTF4P34130 210 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 CENPAP49450 140 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 LGALS3BPQ08380 585 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 SNTB1Q13884 538 aaKnown RBP12.21□□□□□ -0.45
TRAF4-215ENST00000584944 TSC22D1Q15714 1073 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 CEACAM16Q2WEN9 425 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 SLC36A3Q495N2 470 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 THEM4Q5T1C6 240 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 ANKRD16Q6P6B7 361 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 DNM1P34Q6PK57 102 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 TMEM179BQ7Z7N9 219 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 P2RY8Q86VZ1 359 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 HS3ST5Q8IZT8 346 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 ZNF433Q8N7K0 673 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-215ENST00000584944 C1orf162Q8NEQ5 155 aaPredicted RBP12.21□□□□□ -0.45
TRAF4-215ENST00000584944 LINC01560Q8TB33 94 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 FAM222BQ8WU58 562 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 EME1Q96AY2 570 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 TSPAN32Q96QS1 320 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 GPA33Q99795 319 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 PKP2Q99959 881 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 NIPSNAP1Q9BPW8 284 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 SPOCK3Q9BQ16 436 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 ALG12Q9BV10 488 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 TSSK6Q9BXA6 273 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 PRRG3Q9BZD7 231 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 KCNN2Q9H2S1 579 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 GPR35Q9HC97 309 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 OAZ3Q9UMX2 235 aa12.21□□□□□ -0.45
TRAF4-215ENST00000584944 IMPA2O14732 288 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 AHCYL1O43865 530 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 TRMUO75648 421 aaKnown RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 PGA4P0DJD7 388 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 PGA3P0DJD8 388 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 APEHP13798 732 aaKnown RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 PAICSP22234 425 aaKnown RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 IGFBP5P24593 272 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 SSTR2P30874 369 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 ARF1P84077 181 aaKnown RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 MYBPC1Q00872 1141 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 RCN1Q15293 331 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 ARMC4Q5T2S8 1044 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 CD300LDQ6UXZ3 194 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 WFDC8Q8IUA0 241 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 DMRTC2Q8IXT2 367 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 PQLC1Q8N2U9 271 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 C17orf78Q8N4C9 275 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 CLDN22Q8N7P3 220 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 ACBD4Q8NC06 268 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 NANOS1Q8WY41 292 aaKnown RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 NSMAFQ92636 917 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 RASD2Q96D21 266 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 Q96M85 177 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 DACH2Q96NX9 599 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 GPX7Q96SL4 187 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 RBM4BQ9BQ04 359 aaKnown RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 C9orf16Q9BUW7 83 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 RBM4Q9BWF3 364 aaKnown RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 OR10A4Q9H209 315 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 NTN4Q9HB63 628 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 NRIP3Q9NQ35 241 aa12.2□□□□□ -0.46
TRAF4-215ENST00000584944 MAGED1Q9Y5V3 778 aaPredicted RBP12.2□□□□□ -0.46
TRAF4-215ENST00000584944 A0A096LPE4 126 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 A0A1W2PPL8 197 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 A0A1W2PPZ6 126 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 PRSS37A4D1T9 235 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 ZNF99A8MXY4 864 aaPredicted RBP12.19□□□□□ -0.46
TRAF4-215ENST00000584944 H3BNX3 289 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 DHHO43323 396 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 OSMP13725 252 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 ZNF3P17036 446 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 COX5AP20674 150 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 PPA1Q15181 289 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 TIMM23BQ5SRD1 257 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 SLC35F1Q5T1Q4 408 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 SLC27A4Q6P1M0 643 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 LEG1Q6P5S2 330 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 KLHL17Q6TDP4 642 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 ZNF813Q6ZN06 617 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 LRRC75AQ8NAA5 344 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 OR52N5Q8NH56 324 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 TMEM54Q969K7 222 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 OTULINQ96BN8 352 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 C14orf79Q96F83 325 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 SLC38A2Q96QD8 506 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 CIB1Q99828 191 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 SMURF2Q9HAU4 748 aa12.19□□□□□ -0.46
TRAF4-215ENST00000584944 MOV10Q9HCE1 1003 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms