RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CLRN1P58418 232 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 CTXN1P60606 82 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 SPIBQ01892 262 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 BNIP1Q12981 228 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 PGGHGQ32M88 737 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 DTX2Q86UW9 622 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 OR52J3Q8NH60 311 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 ZNF519Q8TB69 540 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 SMAP2Q8WU79 429 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-222ENST00000584908 MCHR2Q969V1 340 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 FAM46AQ96IP4 442 aaKnown RBP14.15□□□□□ -0.14
ERBB2-222ENST00000584908 ZNF75AQ96N20 296 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 GPX7Q96SL4 187 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-222ENST00000584908 BTBD10Q9BSF8 475 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 THTPAQ9BU02 230 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 ALG12Q9BV10 488 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 KATNB1Q9BVA0 655 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 DENND2DQ9H6A0 471 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-222ENST00000584908 KRCC1Q9NPI7 259 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-222ENST00000584908 CISD1Q9NZ45 108 aaKnown RBP14.15□□□□□ -0.14
ERBB2-222ENST00000584908 ZNF346Q9UL40 294 aaKnown RBP14.15□□□□□ -0.14
ERBB2-222ENST00000584908 USF3Q68DE3 2245 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 MED13LQ71F56 2210 aa14.15□□□□□ -0.14
ERBB2-222ENST00000584908 OVOL3O00110 214 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 GYG2O15488 501 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 MGRN1O60291 552 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 ENTPD5O75356 428 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 SEC14L2O76054 403 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 NR2C1P13056 603 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 B4GALT1P15291 398 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 RRM2P31350 389 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 ARR3P36575 388 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 TUBA1BP68363 451 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 TUBA4AP68366 448 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 SLC22A25Q6T423 547 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 TUBA1AQ71U36 451 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 ZER1Q7Z7L7 766 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 LURAP1LQ8IV03 231 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 DEPDC4Q8N2C3 294 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 PIAS4Q8N2W9 510 aaPredicted RBP14.15□□□□□ -0.15
ERBB2-222ENST00000584908 FNDC8Q8TC99 324 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 TMEM171Q8WVE6 324 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 HDAC2Q92769 488 aaKnown RBP14.15□□□□□ -0.15
ERBB2-222ENST00000584908 TSPAN32Q96QS1 320 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 GSX2Q9BZM3 304 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 ZNF701Q9NV72 531 aaPredicted RBP14.15□□□□□ -0.15
ERBB2-222ENST00000584908 TMEM38BQ9NVV0 291 aa14.15□□□□□ -0.15
ERBB2-222ENST00000584908 A6NIZ1 184 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 E7EQL1 145 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 SMPD2O60906 423 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 SOD3P08294 240 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 CD14P08571 375 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 CECR9P0C854 216 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 FXYD6P3P58550 94 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 RAP1BP61224 184 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 RAP1AP62834 184 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 B3GLCTQ6Y288 498 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 FAM122BQ7Z309 247 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 MDP1Q86V88 176 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 KRTAP1-3Q8IUG1 177 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 SLC22A24Q8N4F4 322 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 ARIH2OSQ8N7S6 290 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 CCDC124Q96CT7 223 aaKnown RBP14.14□□□□□ -0.15
ERBB2-222ENST00000584908 RSRC1Q96IZ7 334 aaKnown RBP14.14□□□□□ -0.15
ERBB2-222ENST00000584908 GPA33Q99795 319 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 DHRS9Q9BPW9 319 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 NDEL1Q9GZM8 345 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 FAIMQ9NVQ4 179 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 AURKCQ9UQB9 309 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 LYVE1Q9Y5Y7 322 aa14.14□□□□□ -0.15
ERBB2-222ENST00000584908 AQP12BA6NM10 295 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 AHCYL1O43865 530 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 DNAJC8O75937 253 aaPredicted RBP14.13□□□□□ -0.15
ERBB2-222ENST00000584908 NDUFB2O95178 105 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 CD8AP01732 235 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 HLA-HP01893 362 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 OR8G3PP0DMU2 310 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 FPR3P25089 353 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 ACVR1BP36896 505 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 MRPS34P82930 218 aaKnown RBP14.13□□□□□ -0.15
ERBB2-222ENST00000584908 NAAAQ02083 359 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 CHRNB3Q05901 458 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 GSG1Q2KHT4 349 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 FAM98BQ52LJ0 330 aaKnown RBP14.13□□□□□ -0.15
ERBB2-222ENST00000584908 THEM4Q5T1C6 240 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 ZNF544Q6NX49 715 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 C1orf94Q6P1W5 598 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 SLC25A47Q6Q0C1 308 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 DPPA2Q7Z7J5 298 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 MYPOPQ86VE0 399 aaPredicted RBP14.13□□□□□ -0.15
ERBB2-222ENST00000584908 IGFN1Q86VF2 1251 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 SKA3Q8IX90 412 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 AQP12AQ8IXF9 295 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 LINC00471Q8N535 108 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 SYT14Q8NB59 555 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 IL17RDQ8NFM7 739 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 NANOS1Q8WY41 292 aaKnown RBP14.13□□□□□ -0.15
ERBB2-222ENST00000584908 TRAF4Q9BUZ4 470 aaPredicted RBP14.13□□□□□ -0.15
ERBB2-222ENST00000584908 TRIM15Q9C019 465 aa14.13□□□□□ -0.15
ERBB2-222ENST00000584908 CXorf56Q9H5V9 222 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms