RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ASB3Q9Y575 518 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 F11RQ9Y624 299 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 NFASCO94856 1347 aa2.4□□□□□ -2.03
PPP4R1-227ENST00000583988 IGKV1D-13A0A0B4J2D9 117 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 KIR2DL5BA0A0G2JN68 375 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 KIR2DL5BA0A0G2JPC4 375 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF726A6NNF4 738 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 BET1O15155 118 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 PSTPIP1O43586 416 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 ANGPTL7O43827 346 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF324O75467 553 aaPredicted RBP2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 PALMO75781 387 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 RETP07949 1114 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 IGKV1-13P0DP09 117 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 NCF2P19878 526 aaPredicted RBP2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 AK4P27144 223 aaPredicted RBP2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 SERPINB5P36952 375 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 UBE2AP49459 152 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 ZNF136P52737 540 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 MRPS22P82650 360 aaKnown RBP2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 PRPSAP1Q14558 356 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 ZBED5Q49AG3 693 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 PRAMEF5Q5TYX0 476 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 PRAMEF6Q5VXH4 476 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 C19orf35Q6ZS72 473 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 NANOGNBQ7Z5D8 188 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 KIR2DL5AQ8N109 375 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 KIR2DL5BQ8NHK3 375 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 FAM110BQ8TC76 370 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 ZFP90Q8TF47 636 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 STARD8Q92502 1023 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 PIK3IP1Q96FE7 263 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 C12orf42Q96LP6 360 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 GON7Q9BXV9 100 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 ILKAPQ9H0C8 392 aaPredicted RBP2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 RPP21Q9H633 154 aaKnown RBP2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 PATZ1Q9HBE1 687 aaKnown RBP2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 IKBKGQ9Y6K9 419 aa2.39□□□□□ -2.03
PPP4R1-227ENST00000583988 IGHV3-66A0A0C4DH42 116 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 ANKRD63C9JTQ0 380 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 H0YHG0 523 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 FOXE1O00358 373 aaPredicted RBP2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 MRPS12O15235 138 aaKnown RBP2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 CASP14P31944 242 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 SSR4P51571 173 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 PLP1P60201 277 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 ACTA1P68133 377 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 BST1Q10588 318 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 RSPO1Q2MKA7 263 aaPredicted RBP2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 DEFB116Q30KQ4 102 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 FAM71E1Q6IPT2 247 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 UQCC3Q6UW78 93 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 ZFP2Q6ZN57 461 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 STRADAQ7RTN6 431 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 CDR2LQ86X02 465 aaPredicted RBP2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 PUSL1Q8N0Z8 303 aaKnown RBP2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 SPATA4Q8NEY3 305 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 OR9K2Q8NGE7 335 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 OR1L6Q8NGR2 347 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 RHEBL1Q8TAI7 183 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 SLC2A14Q8TDB8 520 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 SHC3Q92529 594 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 TMEM54Q969K7 222 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 DNAJC19Q96DA6 116 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 RARRES2Q99969 163 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 GABARAPL3Q9BY60 117 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 MRPL37Q9BZE1 423 aaKnown RBP2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 UGT1A7Q9HAW7 530 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 UGT1A10Q9HAW8 530 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 UGT1A8Q9HAW9 530 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 NUP50Q9UKX7 468 aa2.38□□□□□ -2.03
PPP4R1-227ENST00000583988 AKNAQ7Z591 1439 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 BTBD17A6NE02 478 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 CISD3P0C7P0 127 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 FOXN2P32314 431 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 GPX6P59796 221 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 TCP10Q12799 353 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 MADCAM1Q13477 382 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 EIF4EBP1Q13541 118 aaPredicted RBP2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 HDDC2Q7Z4H3 204 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 NOXO1Q8NFA2 376 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 OR4S2Q8NH73 311 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 MED8Q96G25 268 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 WFIKKN1Q96NZ8 548 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 P2RX4Q99571 388 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 LZTS2Q9BRK4 669 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 ISYNA1Q9NPH2 558 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 SLC7A8Q9UHI5 535 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 TET2Q6N021 2002 aaPredicted RBP2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 MN1Q10571 1320 aaPredicted RBP2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 MYO10Q9HD67 2058 aa2.37□□□□□ -2.03
PPP4R1-227ENST00000583988 USP47Q96K76 1375 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 RAB3DO95716 219 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 SERPIND1P05546 499 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 CRYGBP07316 175 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 TNNT2P45379 298 aaPredicted RBP2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 CYB561P49447 251 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 TPMTP51580 245 aa2.36□□□□□ -2.03
PPP4R1-227ENST00000583988 LINC00315P59091 139 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms