RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 MS4A2Q01362 244 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 NPRL3Q12980 569 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 TAF11Q15544 211 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 ZBED5Q49AG3 693 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 ARMC4Q5T2S8 1044 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 LRFN4Q6PJG9 635 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 B3GLCTQ6Y288 498 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 HDAC2Q92769 488 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 MCHR2Q969V1 340 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 GTPBP3Q969Y2 492 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 LRGUKQ96M69 825 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 CRNNQ9UBG3 495 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF346Q9UL40 294 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 TMCC3Q9ULS5 477 aa10.98□□□□□ -0.65
SMARCE1-218ENST00000582955 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 TCRBV5S2A0A599 114 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 SH3PXD2BA1X283 911 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 CENPBD1B2RD01 187 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 ARHGEF9O43307 516 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 OR10H3O60404 316 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 ENTPD5O75356 428 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 FARS2O95363 451 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 IGHMP01871 453 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 CELA3BP08861 270 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 DANCRP0C864 163 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 ARR3P36575 388 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 OMPP47874 163 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 LIMS1P48059 325 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 PTH2RP49190 550 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 FABP6P51161 128 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 ERVK-25P63136 954 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 PIGFQ07326 219 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 FHL1Q13642 323 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 HIST3H3Q16695 136 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 GSG1Q2KHT4 349 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 PGGHGQ32M88 737 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 C3orf36Q3SXR2 165 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 DNAL1Q4LDG9 190 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF627Q7L945 461 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 PIWIL3Q7Z3Z3 882 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 FBXL14Q8N1E6 418 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 LRRC75A-AS1Q8N1F1 130 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 SLC22A24Q8N4F4 322 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 FAM169BQ8N8A8 192 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 LRRC75AQ8NAA5 344 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 HTRA1Q92743 480 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 ASB9Q96DX5 294 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 RSRC1Q96IZ7 334 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 TSPAN32Q96QS1 320 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 DHRS9Q9BPW9 319 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 KATNB1Q9BVA0 655 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 MRPL13Q9BYD1 178 aaKnown RBP10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 TRIM15Q9C019 465 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 SEC61A2Q9H9S3 476 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 TMEM38BQ9NVV0 291 aa10.97□□□□□ -0.65
SMARCE1-218ENST00000582955 UNC119BA6NIH7 251 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 A6NIZ1 184 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 TMCC2O75069 709 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 UBL3O95164 117 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 NDUFB2O95178 105 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 SLC2A10O95528 541 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 RAB36O95755 333 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 IGKV3-15P01624 115 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 IGLV1-44P01699 117 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 OR8G3PP0DMU2 310 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 NR2C1P13056 603 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 CDKN1AP38936 164 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 PTDSS1P48651 473 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 RAP1BP61224 184 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 RAP1AP62834 184 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 ADAM8P78325 824 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 NAAAQ02083 359 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 CHRNB3Q05901 458 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 FMODQ06828 376 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 FAM98BQ52LJ0 330 aaKnown RBP10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 Q5PR19 223 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 AGAP6Q5VW22 663 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 SHEQ5VZ18 495 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 FAM205BPQ63HN1 556 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 MYPOPQ86VE0 399 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 TGIF2LYQ8IUE0 185 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 SKA3Q8IX90 412 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 ZNF519Q8TB69 540 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 IGFBPL1Q8WX77 278 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 NSMAFQ92636 917 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 SH3GL3Q99963 347 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 FUZQ9BT04 418 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 TRAF4Q9BUZ4 470 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 ALG12Q9BV10 488 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 GSX2Q9BZM3 304 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 MAGIXQ9H6Y5 334 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 NOX3Q9HBY0 568 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 B3GNT2Q9NY97 397 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 GRHPRQ9UBQ7 328 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 IL20RAQ9UHF4 553 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 SIGLEC7Q9Y286 467 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 ADAM18Q9Y3Q7 739 aa10.96□□□□□ -0.65
SMARCE1-218ENST00000582955 HEATR1Q9H583 2144 aaKnown RBP10.96□□□□□ -0.66
SMARCE1-218ENST00000582955 CELSR1Q9NYQ6 3014 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms