RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453		K7ENP7	123 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	PLPP1	O14494	284 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	HDAC3	O15379	428 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TXNL1	O43396	289 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ERI3	O43414	337 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	NOL3	O60936	208 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	LYPLA1	O75608	230 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	KLF7	O75840	302 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CDK2AP2	O75956	126 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ZFAND5	O76080	213 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	OR4F21	O95013	312 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	PDYN	P01213	254 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CHRNG	P07510	517 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	FH	P07954	510 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	RNH1	P13489	461 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MMP11	P24347	488 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ATP5A1	P25705	553 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	PTPN4	P29074	926 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	HMOX2	P30519	316 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	SFTPD	P35247	375 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	OR3A3	P47888	321 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC1A6	P48664	564 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TNFSF10	P50591	281 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	RPL14	P50914	215 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CNN1	P51911	297 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	HSD17B7	P56937	341 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	RAB38	P57729	211 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ABCE1	P61221	599 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	RPS15	P62841	145 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	PSPH	P78330	225 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	IGLV3-21	P80748	117 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	HTD2	P86397	168 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC3A1	Q07837	685 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	BST1	Q10588	318 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	STX3	Q13277	289 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	OPCML	Q14982	345 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	KIAA0040	Q15053	153 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CEBPE	Q15744	281 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MAPK11	Q15759	364 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CHI3L2	Q15782	390 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	HKDC1	Q2TB90	917 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	DEFB110	Q30KQ9	67 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	OR4C11	Q6IEV9	310 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM205	Q6UW68	189 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CD164L2	Q6UWJ8	174 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	DLEU7	Q6UYE1	221 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453		Q6ZSR9	355 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	C5orf24	Q7Z6I8	188 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MYPOP	Q86VE0	399 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ZFAND4	Q86XD8	727 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	RAB43	Q86YS6	212 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	NATD1	Q8N6N6	113 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CCNYL1	Q8N7R7	359 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ACOT4	Q8N9L9	421 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MAPK1IP1L	Q8NDC0	245 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	OR4C3	Q8NH37	302 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	OR51Q1	Q8NH59	317 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	OR2T6	Q8NHC8	308 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CT55	Q8WUE5	264 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TWIST2	Q8WVJ9	160 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	SELENOM	Q8WWX9	145 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	STARD8	Q92502	1023 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF75CP	Q92670	426 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TAF15	Q92804	592 aa	Known RBP eCLIP	2.67	□□□□□ -1.98	2e-6	■■■■□ 19.6
MSI2-215	ENST00000582453	RFT1	Q96AA3	541 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MOCOS	Q96EN8	888 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	C19orf60	Q96EN9	201 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	PPP3R2	Q96LZ3	170 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MAGEB18	Q96M61	343 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CCNL2	Q96S94	520 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	SORT1	Q99523	831 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	PELO	Q9BRX2	385 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MCRIP2	Q9BUT9	160 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC7A5P2	Q9GIP4	190 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	AICDA	Q9GZX7	198 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ILKAP	Q9H0C8	392 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	CENPH	Q9H3R5	247 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	GPN2	Q9H9Y4	310 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MEAF6	Q9HAF1	191 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	PLCXD1	Q9NUJ7	323 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TAS2R7	Q9NYW3	318 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TAS2R3	Q9NYW6	316 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ACTR3B	Q9P1U1	418 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF282	Q9UDV7	671 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	C19orf25	Q9UFG5	118 aa	Predicted RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	FARSA	Q9Y285	508 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MRPS33	Q9Y291	106 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	EXOG	Q9Y2C4	368 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	TMED7	Q9Y3B3	224 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	STRAP	Q9Y3F4	350 aa	Known RBP	2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	NAALAD2	Q9Y3Q0	740 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	DNAJC15	Q9Y5T4	150 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	SPACA6	W5XKT8	324 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	MYLK	Q15746	1914 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	FRYL	O94915	3013 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	BPTF	Q12830	3046 aa		2.67	□□□□□ -1.98
MSI2-215	ENST00000582453	ACACB	O00763	2458 aa		2.66	□□□□□ -1.98
MSI2-215	ENST00000582453	IGF2R	P11717	2491 aa		2.66	□□□□□ -1.98
MSI2-215	ENST00000582453	IDS	B3KWA1	339 aa		2.66	□□□□□ -1.98
MSI2-215	ENST00000582453		E5RGE8	158 aa		2.66	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms