RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PLA2G12AQ9BZM1 189 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 LINC00470Q9BZP3 86 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 UCK2Q9BZX2 261 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 OPN3Q9H1Y3 402 aaPredicted RBP3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 NRIP3Q9NQ35 241 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 GLRX2Q9NS18 164 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC7A10Q9NS82 523 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 GALNT8Q9NY28 637 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 IL20Q9NYY1 176 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF224Q9NZL3 707 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SELENONQ9NZV5 590 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 KLHL9Q9P2J3 617 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RPS6KB2Q9UBS0 482 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 DNAJB9Q9UBS3 223 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 ADAM30Q9UKF2 790 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC13A4Q9UKG4 626 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RCE1Q9Y256 329 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 RASD1Q9Y272 281 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 MED31Q9Y3C7 131 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 UGT2A1Q9Y4X1 527 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 CORINQ9Y5Q5 1042 aa3.33□□□□□ -1.88
SMARCE1-215ENST00000578995 FLNBO75369 2602 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 A0A1W2PPR1 153 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 FAM90A27PA6NNH2 459 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 CYSRT1A8MQ03 144 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 EFCAB9A8MZ26 197 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 RPL36A-HNRNPH2H7BZ11 118 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 TNFRSF11BO00300 401 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ARPC3O15145 178 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 CLOCKO15516 846 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 UPK3AO75631 287 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 KRT36O76013 467 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 VAMP5O95183 116 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SYNGR4O95473 234 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 CNOT4O95628 575 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ADAP00813 363 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 CST1P01037 141 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 GASTP01350 101 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PSKH1P11801 424 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 APEHP13798 732 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ITGA2P17301 1181 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 HOXB6P17509 224 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PSMB1P20618 241 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 BMP5P22003 454 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PRKACGP22612 351 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 IGHV1-2P23083 117 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 EPHA2P29317 976 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 GCKP35557 465 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC9A3P48764 834 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ASCL1P50553 236 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 DAPP51397 102 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SIRPAP78324 504 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ELF3P78545 371 aaPredicted RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 EFNB1P98172 346 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SORDQ00796 357 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 POU3F1Q03052 451 aaPredicted RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 TSPAN31Q12999 210 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 FOXE3Q13461 319 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 GK3PQ14409 553 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 MELKQ14680 651 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 MFSD13AQ14CX5 517 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SF3B4Q15427 424 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ACKR1Q16570 336 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC25A35Q3KQZ1 300 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 KRTAP15-1Q3LI76 137 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ANKDD1AQ495B1 522 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ZBED5Q49AG3 693 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 FGD3Q5JSP0 725 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PDSS1Q5T2R2 415 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 KDM4DQ6B0I6 523 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 MTFR2Q6P444 385 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SHQ1Q6PI26 577 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 XKRXQ6PP77 449 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 KLHL17Q6TDP4 642 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF730Q6ZMV8 503 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 Q6ZT83 130 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 RASSF6Q6ZTQ3 369 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PTCHD4Q6ZW05 846 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 MAMDC2Q7Z304 686 aaPredicted RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 AMIGO2Q86SJ2 522 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 IGFN1Q86VF2 1251 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 C20orf196Q8IYI0 205 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PARP8Q8N3A8 854 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNF433Q8N7K0 673 aaPredicted RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 WDR31Q8NA23 367 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 OR10G2Q8NGC3 310 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 OR52J3Q8NH60 311 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 OR6X1Q8NH79 312 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ZNRF4Q8WWF5 429 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 ASB5Q8WWX0 329 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 PYDC1Q8WXC3 89 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 LRTOMTQ8WZ04 291 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 HDAC2Q92769 488 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 RNASE6Q93091 150 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 NABP1Q96AH0 204 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 SLC25A36Q96CQ1 311 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 NRBF2Q96F24 287 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 RSRC1Q96IZ7 334 aaKnown RBP3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 TNFRSF13CQ96RJ3 184 aa3.32□□□□□ -1.88
SMARCE1-215ENST00000578995 FEVQ99581 238 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms