RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 UBL3O95164 117 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 FABP3P05413 133 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 CECR9P0C854 216 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SERPINF1P36955 418 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 CDKN1AP38936 164 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SLC9A3P48764 834 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 CENPAP49450 140 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 RPL27P61353 136 aaKnown RBP5.71□□□□□ -1.5
TRAF4-213ENST00000578917 ERVK-25P63136 954 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 LSM11P83369 360 aaKnown RBP eCLIP5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SPIBQ01892 262 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 NAAAQ02083 359 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 DGCR6Q14129 220 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 PGGHGQ32M88 737 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SLC36A2Q495M3 483 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 ZBED5Q49AG3 693 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 THEM4Q5T1C6 240 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF544Q6NX49 715 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SEZ6L2Q6UXD5 910 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 NHLRC1Q6VVB1 395 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 RINLQ6ZS11 566 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SLC16A14Q7RTX9 510 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 ZDHHC21Q8IVQ6 265 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SKA3Q8IX90 412 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 LRRC18Q8N456 261 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SLC22A24Q8N4F4 322 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 FAM86B1Q8N7N1 296 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 FAM169BQ8N8A8 192 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 OR4K5Q8NGD3 323 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 OR13C2Q8NGS9 318 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SLC7A13Q8TCU3 470 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 LIPHQ8WWY8 451 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 TMEM54Q969K7 222 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 MCHR2Q969V1 340 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 BOD1Q96IK1 185 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 FAM46AQ96IP4 442 aaKnown RBP5.71□□□□□ -1.5
TRAF4-213ENST00000578917 Q96MF0 132 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 ZNF347Q96SE7 839 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 SH3GL3Q99963 347 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 VRK1Q99986 396 aaPredicted RBP5.71□□□□□ -1.5
TRAF4-213ENST00000578917 THTPAQ9BU02 230 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 GSX2Q9BZM3 304 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 LRMDAQ9H2I8 198 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 TXNIPQ9H3M7 391 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 BARX1Q9HBU1 254 aaPredicted RBP5.71□□□□□ -1.5
TRAF4-213ENST00000578917 CCNB1IP1Q9NPC3 277 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 CBLN4Q9NTU7 201 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 FBXL3Q9UKT7 428 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 HIF3AQ9Y2N7 669 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 USF3Q68DE3 2245 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 ARID1AO14497 2285 aa5.71□□□□□ -1.5
TRAF4-213ENST00000578917 FREM1Q5H8C1 2179 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 CADP27708 2225 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 TRBV4-1A0A0J9YWV2 114 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 IQCMA0A1B0GVH7 501 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 A0A1W2PPL8 197 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 SH3PXD2BA1X283 911 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 UNC119BA6NIH7 251 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 CENPBD1B2RD01 187 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 GNGT2O14610 69 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 SSX4O60224 188 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 TRMUO75648 421 aaKnown RBP5.7□□□□□ -1.5
TRAF4-213ENST00000578917 KRT36O76013 467 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 PDE5AO76074 875 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 NDUFB2O95178 105 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 SLC2A10O95528 541 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 PTHP01270 115 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 ERCC1P07992 297 aaPredicted RBP5.7□□□□□ -1.5
TRAF4-213ENST00000578917 CELA3BP08861 270 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 OR4A8P0C604 315 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 DANCRP0C864 163 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 PATE4P0C8F1 98 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 PGA4P0DJD7 388 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 PGA3P0DJD8 388 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 FOSL1P15407 271 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 NPR2P20594 1047 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 FUT4P22083 530 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 CCNOP22674 350 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 NOS3P29474 1203 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 CDAP32320 146 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 NUDT6P53370 316 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 SELENOVP59797 346 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 SNRPD2P62316 118 aaKnown RBP5.7□□□□□ -1.5
TRAF4-213ENST00000578917 VLDLRP98155 873 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 HSF2Q03933 536 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 RUNX1T1Q06455 604 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 DAG1Q14118 895 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
TRAF4-213ENST00000578917 RAB39AQ14964 217 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 ETFDHQ16134 617 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 CLEC12BQ2HXU8 276 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 C3orf36Q3SXR2 165 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 FAM98BQ52LJ0 330 aaKnown RBP5.7□□□□□ -1.5
TRAF4-213ENST00000578917 FAM205BPQ63HN1 556 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 KRT80Q6KB66 452 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 PRSS57Q6UWY2 283 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 TMPRSS11FQ6ZWK6 438 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 TRPM8Q7Z2W7 1104 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 DPPA2Q7Z7J5 298 aa5.7□□□□□ -1.5
TRAF4-213ENST00000578917 WDFY1Q8IWB7 410 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms